STRINGSTRING
UMAG_10088 UMAG_10088 UMAG_05131 UMAG_05131 UMAG_02583 UMAG_02583 UMAG_11350 UMAG_11350 UMAG_03069 UMAG_03069 UMAG_02622 UMAG_02622 UMAG_03737 UMAG_03737 UMAG_05450 UMAG_05450
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UMAG_10088Chromosome 1, whole genome shotgun sequence. (742 aa)
UMAG_05131Putative Acetoacetyl-CoA synthetase. (709 aa)
UMAG_02583Putative long-chain fatty acid transporter. (641 aa)
UMAG_11350Chromosome 1, whole genome shotgun sequence. (1136 aa)
UMAG_03069Acetyl-coenzyme A synthetase. (664 aa)
UMAG_02622Uncharacterized protein. (279 aa)
UMAG_03737Chromosome 10, whole genome shotgun sequence. (669 aa)
UMAG_05450AMP-binding domain-containing protein. (695 aa)
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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