STRINGSTRING
UMAG_00789 UMAG_00789 UMAG_11660 UMAG_11660 UMAG_01835 UMAG_01835
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UMAG_00789Chromosome 1, whole genome shotgun sequence. (648 aa)
UMAG_11660Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (713 aa)
UMAG_01835Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (764 aa)
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.