STRINGSTRING
UMAG_10901 UMAG_10901 UMAG_04151 UMAG_04151 UMAG_03863 UMAG_03863 UMAG_02565 UMAG_02565 UMAG_02056 UMAG_02056 UMAG_00920 UMAG_00920 UMAG_11451 UMAG_11451 UMAG_05334 UMAG_05334 UMAG_10751 UMAG_10751 UMAG_10917 UMAG_10917 UMAG_04460 UMAG_04460 UMAG_04069 UMAG_04069 UMAG_03434 UMAG_03434 UMAG_03550 UMAG_03550 UMAG_05151 UMAG_05151 UMAG_05156 UMAG_05156 UMAG_06296 UMAG_06296 UMAG_11392 UMAG_11392 UMAG_00848 UMAG_00848 UMAG_00669 UMAG_00669 UMAG_00817 UMAG_00817 UMAG_06213 UMAG_06213 UMAG_06219 UMAG_06219 UMAG_11580 UMAG_11580 UMAG_05563 UMAG_05563 UMAG_10551 UMAG_10551 UMAG_10936 UMAG_10936 UMAG_04902 UMAG_04902 UMAG_04722 UMAG_04722 UMAG_04367 UMAG_04367 UMAG_04623 UMAG_04623 UMAG_10429 UMAG_10429 UMAG_03898 UMAG_03898 UMAG_05888 UMAG_05888 UMAG_04165 UMAG_04165 UMAG_10359 UMAG_10359 UMAG_12288 UMAG_12288 UMAG_10396 UMAG_10396 UMAG_03766 UMAG_03766 UMAG_15013 UMAG_15013 UMAG_04588 UMAG_04588 UMAG_10982 UMAG_10982 UMAG_11946 UMAG_11946 UMAG_02817 UMAG_02817 UMAG_10433 UMAG_10433 UMAG_02911 UMAG_02911 UMAG_10604 UMAG_10604 UMAG_03001 UMAG_03001 UMAG_02639 UMAG_02639 UMAG_15061 UMAG_15061 UMAG_10512 UMAG_10512 UMAG_11724 UMAG_11724 UMAG_03491 UMAG_03491 UMAG_02324 UMAG_02324 UMAG_05141 UMAG_05141 UMAG_02579 UMAG_02579 UMAG_00907 UMAG_00907 UMAG_00922 UMAG_00922 UMAG_11911 UMAG_11911 UMAG_11304 UMAG_11304 UMAG_10194 UMAG_10194 UMAG_05197 UMAG_05197 UMAG_10774 UMAG_10774 UMAG_00216 UMAG_00216 UMAG_10027 UMAG_10027 UMAG_11420 UMAG_11420 UMAG_01185 UMAG_01185 UMAG_10923 UMAG_10923 UMAG_00729 UMAG_00729 UMAG_00527 UMAG_00527 UMAG_05207 UMAG_05207 CPR6 CPR6 SYF1 SYF1 RRI1 RRI1 TFB5 TFB5 ISY1 ISY1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UMAG_10901Putative polyubiquitin. (228 aa)
UMAG_04151Chromosome 12, whole genome shotgun sequence. (850 aa)
UMAG_03863DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1774 aa)
UMAG_02565Integrase catalytic domain-containing protein. (493 aa)
UMAG_02056Uncharacterized protein. (253 aa)
UMAG_00920Putative DNA replication factor C subunit protein. (353 aa)
UMAG_11451Chromosome 1, whole genome shotgun sequence. (354 aa)
UMAG_05334Chromosome 19, whole genome shotgun sequence. (170 aa)
UMAG_10751BSD domain-containing protein. (679 aa)
UMAG_10917Chromosome 16, whole genome shotgun sequence. (106 aa)
UMAG_04460DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (161 aa)
UMAG_04069Putative TFIIH/NER complex ATPase/helicase subunit SSL2. (940 aa)
UMAG_03434Replication factor C subunit 1. (950 aa)
UMAG_03550Chromosome 9, whole genome shotgun sequence. (329 aa)
UMAG_05151CYCLIN domain-containing protein; Belongs to the cyclin family. (493 aa)
UMAG_05156Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (623 aa)
UMAG_06296RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (491 aa)
UMAG_11392Uncharacterized protein. (156 aa)
UMAG_00848PCI domain-containing protein. (572 aa)
UMAG_00669Chromosome 1, whole genome shotgun sequence. (401 aa)
UMAG_00817Chromosome 1, whole genome shotgun sequence. (482 aa)
UMAG_06213Uncharacterized protein. (1143 aa)
UMAG_06219Uncharacterized protein. (334 aa)
UMAG_11580Retrotransposon HobS hobase. (1083 aa)
UMAG_05563CULLIN_2 domain-containing protein; Belongs to the cullin family. (822 aa)
UMAG_10551General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (516 aa)
UMAG_10936Chromosome 16, whole genome shotgun sequence. (71 aa)
UMAG_04902Chromosome 15, whole genome shotgun sequence; Belongs to the protein kinase superfamily. (379 aa)
UMAG_04722RPOL4c domain-containing protein. (175 aa)
UMAG_04367Reverse transcriptase domain-containing protein. (452 aa)
UMAG_04623Putative replication factor C subunit 3. (341 aa)
UMAG_10429DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1241 aa)
UMAG_03898Uncharacterized protein. (1532 aa)
UMAG_05888Uncharacterized protein. (315 aa)
UMAG_04165Chromosome 12, whole genome shotgun sequence. (114 aa)
UMAG_10359DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (133 aa)
UMAG_12288Integrase catalytic domain-containing protein. (999 aa)
UMAG_10396Chromosome 8, whole genome shotgun sequence. (993 aa)
UMAG_03766Chromosome 10, whole genome shotgun sequence. (559 aa)
UMAG_15013PCI domain-containing protein. (518 aa)
UMAG_04588Putative ubiquitin-ribosomal 40S subunit protein S31 fusion protein. (159 aa)
UMAG_10982Chromosome 8, whole genome shotgun sequence. (139 aa)
UMAG_11946Chromosome 7, whole genome shotgun sequence. (503 aa)
UMAG_02817Chromosome 7, whole genome shotgun sequence. (243 aa)
UMAG_10433Chromosome 12, whole genome shotgun sequence. (138 aa)
UMAG_02911Chromosome 7, whole genome shotgun sequence; Belongs to the peptidase C19 family. (1453 aa)
UMAG_10604CPSF_A domain-containing protein. (1511 aa)
UMAG_03001Chromosome 7, whole genome shotgun sequence. (887 aa)
UMAG_02639Putative ubiquitin-specific processing protease 21; Belongs to the peptidase C19 family. (1115 aa)
UMAG_15061Zds_C domain-containing protein. (1251 aa)
UMAG_10512Chromosome 10, whole genome shotgun sequence. (208 aa)
UMAG_11724XPA_C domain-containing protein. (356 aa)
UMAG_03491Chromosome 9, whole genome shotgun sequence. (306 aa)
UMAG_02324RNA_pol_L_2 domain-containing protein. (145 aa)
UMAG_05141UmuC domain-containing protein. (682 aa)
UMAG_02579Uncharacterized protein. (285 aa)
UMAG_00907Uncharacterized protein. (487 aa)
UMAG_00922Uncharacterized protein. (422 aa)
UMAG_11911Putative ubiquitin. (457 aa)
UMAG_11304Uncharacterized protein. (547 aa)
UMAG_10194Putative DNA-directed RNA polymerase core subunit RPB10. (71 aa)
UMAG_05197Uncharacterized protein. (436 aa)
UMAG_10774Uncharacterized protein. (248 aa)
UMAG_00216Chromosome 1, whole genome shotgun sequence. (384 aa)
UMAG_10027Chromosome 1, whole genome shotgun sequence. (535 aa)
UMAG_11420Chromosome 1, whole genome shotgun sequence. (164 aa)
UMAG_01185TFIIS central domain-containing protein. (177 aa)
UMAG_10923Chromosome 1, whole genome shotgun sequence. (1090 aa)
UMAG_00729Chromosome 1, whole genome shotgun sequence. (343 aa)
UMAG_00527Chromosome 1, whole genome shotgun sequence. (170 aa)
UMAG_05207CBFD_NFYB_HMF domain-containing protein. (250 aa)
CPR6Peptidyl-prolyl cis-trans isomerase D; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity). (398 aa)
SYF1Pre-mRNA-splicing factor SYF1; Involved in pre-mRNA splicing and cell cycle progression. (1081 aa)
RRI1COP9 signalosome complex subunit 5; Catalytic Component of the COP9 signalosome (CSN) complex that acts as an regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunit of SCF-type E3 ubiquitin-protein ligase complexes; Belongs to the peptidase M67A family. CSN5 subfamily. (406 aa)
TFB5General transcription and DNA repair factor IIH subunit TFB5; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has be [...] (65 aa)
ISY1Pre-mRNA-splicing factor ISY1; Involved in pre-mRNA splicing. (351 aa)
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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