Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BBP | CEF1 | Q4P0H7 | Q4P652 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Pre-mRNA-splicing factor CEF1; Involved in pre-mRNA splicing and cell cycle control. | 0.970 |
| BBP | CWC21 | Q4P0H7 | Q4P0G6 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Pre-mRNA-splicing factor CWC21; Involved in pre-mRNA splicing. May function at or prior to the first catalytic step of splicing at the catalytic center of the spliceosome. May do so by stabilizing the catalytic center or the position of the RNA substrate (By similarity). | 0.760 |
| BBP | LEA1 | Q4P0H7 | Q4P5F9 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | U2 small nuclear ribonucleoprotein A; Involved in pre-mRNA splicing. | 0.458 |
| BBP | PRP5 | Q4P0H7 | Q4PFD9 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Pre-mRNA-processing ATP-dependent RNA helicase PRP5; ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA (By similarity); Belongs to the DEAD box helicase family. DDX46/PRP5 subfamily. | 0.975 |
| BBP | UMAG_00305 | Q4P0H7 | A0A0D1CFU5 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Chromosome 1, whole genome shotgun sequence. | 0.981 |
| BBP | UMAG_00601 | Q4P0H7 | A0A0D1D1C5 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Chromosome 1, whole genome shotgun sequence. | 0.756 |
| BBP | UMAG_01660 | Q4P0H7 | A0A0D1E448 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Uncharacterized protein. | 0.461 |
| BBP | UMAG_02412 | Q4P0H7 | A0A0D1CTT4 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | RRM domain-containing protein. | 0.408 |
| BBP | UMAG_02868 | Q4P0H7 | A0A0D1DZ43 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Chromosome 7, whole genome shotgun sequence. | 0.430 |
| BBP | UMAG_03893 | Q4P0H7 | A0A0D1DZ56 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Uncharacterized protein. | 0.701 |
| BBP | UMAG_04188 | Q4P0H7 | A0A0D1C1G0 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Chromosome 12, whole genome shotgun sequence. | 0.534 |
| BBP | UMAG_04679 | Q4P0H7 | A0A0D1C165 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Uncharacterized protein. | 0.510 |
| BBP | UMAG_04752 | Q4P0H7 | A0A0D1CIA2 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Putative pre-mRNA splicing factor important for catalytic step II. | 0.479 |
| BBP | UMAG_04775 | Q4P0H7 | A0A0D1DS50 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | RRM domain-containing protein. | 0.652 |
| BBP | UMAG_04781 | Q4P0H7 | A0A0D1BXS7 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Small nuclear ribonucleoprotein Sm D2. | 0.510 |
| BBP | UMAG_05241 | Q4P0H7 | A0A0D1CA16 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Putative splicing factor 3b subunit 1. | 0.855 |
| BBP | UMAG_05363 | Q4P0H7 | A0A0D1CHB4 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Chromosome 19, whole genome shotgun sequence. | 0.996 |
| BBP | UMAG_05608 | Q4P0H7 | Q4P2Q5 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.663 |
| BBP | UMAG_05700 | Q4P0H7 | A0A0D1DSQ6 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Chromosome 16, whole genome shotgun sequence. | 0.461 |
| BBP | UMAG_06130 | Q4P0H7 | A0A0D1DTY9 | Branchpoint-bridging protein; Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity). Belongs to the BBP/SF1 family. | Chromosome 21, whole genome shotgun sequence. | 0.975 |
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