STRINGSTRING
DBP2 DBP2 HTB1 HTB1 ESA1 ESA1 UMAG_10569 UMAG_10569 UMAG_12042 UMAG_12042 UMAG_10194 UMAG_10194 UMAG_10190 UMAG_10190 UMAG_10174 UMAG_10174 UMAG_05183 UMAG_05183 UMAG_02324 UMAG_02324 UMAG_10512 UMAG_10512 UMAG_03784 UMAG_03784 UMAG_10433 UMAG_10433 UMAG_15003 UMAG_15003 UMAG_11952 UMAG_11952 UMAG_05022 UMAG_05022 UMAG_10399 UMAG_10399 UMAG_10359 UMAG_10359 UMAG_10417 UMAG_10417 UMAG_03708 UMAG_03708 UMAG_05285 UMAG_05285 UMAG_10429 UMAG_10429 UMAG_04722 UMAG_04722 UMAG_15023 UMAG_15023 UMAG_10936 UMAG_10936 UMAG_01523 UMAG_01523 UMAG_10143 UMAG_10143 UMAG_03061 UMAG_03061 UMAG_03550 UMAG_03550 UMAG_10482 UMAG_10482 UMAG_04551 UMAG_04551 UMAG_04460 UMAG_04460 UMAG_05054 UMAG_05054 UMAG_05486 UMAG_05486 UMAG_05334 UMAG_05334 UMAG_01042 UMAG_01042 UMAG_06273 UMAG_06273 UMAG_03863 UMAG_03863 UMAG_04950 UMAG_04950 UMAG_06046 UMAG_06046
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DBP2ATP-dependent RNA helicase DBP2; ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing. (552 aa)
HTB1Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (142 aa)
ESA1Histone acetyltransferase ESA1; Catalytic component of the NuA4 histone acetyltransferase (HAT) complex which is involved in epigenetic transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4, H3, H2B, H2A and H2A variant H2A.Z. Acetylates histone H4 to form H4K5ac, H4K8ac, H4K12ac and H4K16ac, histone H3 to form H3K14ac, and histone H2A to form H2AK4ac and H2AK7ac. Acetylation of histone H4 is essential for DNA double-strand break repair through homologous recombination. Involved in cell cycle progression. Recruitment to promoters depends on [...] (565 aa)
UMAG_10569Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (443 aa)
UMAG_12042Protein kinase domain-containing protein. (1046 aa)
UMAG_10194Putative DNA-directed RNA polymerase core subunit RPB10. (71 aa)
UMAG_10190Putative histone acetylase. (744 aa)
UMAG_10174Uncharacterized protein. (1178 aa)
UMAG_05183Uncharacterized protein. (214 aa)
UMAG_02324RNA_pol_L_2 domain-containing protein. (145 aa)
UMAG_10512Chromosome 10, whole genome shotgun sequence. (208 aa)
UMAG_03784Chromosome 10, whole genome shotgun sequence. (907 aa)
UMAG_10433Chromosome 12, whole genome shotgun sequence. (138 aa)
UMAG_15003Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (756 aa)
UMAG_11952Chromosome 8, whole genome shotgun sequence. (339 aa)
UMAG_05022Chromosome 15, whole genome shotgun sequence. (1667 aa)
UMAG_10399Chromosome 8, whole genome shotgun sequence; Belongs to the cyclin family. (286 aa)
UMAG_10359DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (133 aa)
UMAG_10417Chromosome 12, whole genome shotgun sequence. (1374 aa)
UMAG_03708Chromosome 10, whole genome shotgun sequence. (1163 aa)
UMAG_05285Serine/threonine-protein phosphatase. (583 aa)
UMAG_10429DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1241 aa)
UMAG_04722RPOL4c domain-containing protein. (175 aa)
UMAG_15023Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1157 aa)
UMAG_10936Chromosome 16, whole genome shotgun sequence. (71 aa)
UMAG_01523Forkhead transcription factor required for pathogenic development. (439 aa)
UMAG_10143Putative TATA-binding protein. (239 aa)
UMAG_03061Chromosome 7, whole genome shotgun sequence. (432 aa)
UMAG_03550Chromosome 9, whole genome shotgun sequence. (329 aa)
UMAG_10482Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (116 aa)
UMAG_04551Uncharacterized protein; Belongs to the cyclin family. (704 aa)
UMAG_04460DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (161 aa)
UMAG_05054Chromosome 15, whole genome shotgun sequence. (1791 aa)
UMAG_05486BHLH domain-containing protein. (833 aa)
UMAG_05334Chromosome 19, whole genome shotgun sequence. (170 aa)
UMAG_01042Fork-head domain-containing protein. (1792 aa)
UMAG_06273NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (722 aa)
UMAG_03863DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1774 aa)
UMAG_04950Chromosome 15, whole genome shotgun sequence. (1114 aa)
UMAG_06046Chromosome 21, whole genome shotgun sequence. (284 aa)
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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