STRINGSTRING
UMAG_00920 UMAG_00920 UMAG_11196 UMAG_11196 UMAG_04976 UMAG_04976 UMAG_05064 UMAG_05064 UMAG_04669 UMAG_04669 UMAG_03434 UMAG_03434 UMAG_10656 UMAG_10656 UMAG_05156 UMAG_05156 UMAG_01458 UMAG_01458 UMAG_01679 UMAG_01679 MCM7 MCM7 UMAG_06131 UMAG_06131 UMAG_04623 UMAG_04623 UMAG_05028 UMAG_05028 UMAG_04529 UMAG_04529 UMAG_05403 UMAG_05403 UMAG_04165 UMAG_04165 UMAG_03766 UMAG_03766 UMAG_03852 UMAG_03852 UMAG_02557 UMAG_02557 UMAG_02760 UMAG_02760 UMAG_01445 UMAG_01445 UMAG_10765 UMAG_10765 UMAG_01646 UMAG_01646 UMAG_02579 UMAG_02579 UMAG_00216 UMAG_00216 UMAG_00366 UMAG_00366 UMAG_01790 UMAG_01790 UMAG_00729 UMAG_00729 UMAG_00527 UMAG_00527 UMAG_05207 UMAG_05207 FEN1 FEN1 POL2 POL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UMAG_00920Putative DNA replication factor C subunit protein. (353 aa)
UMAG_11196DNA ligase. (851 aa)
UMAG_04976Chromosome 15, whole genome shotgun sequence. (510 aa)
UMAG_05064DNA helicase; Belongs to the MCM family. (731 aa)
UMAG_04669DNA_LIGASE_A3 domain-containing protein. (1068 aa)
UMAG_03434Replication factor C subunit 1. (950 aa)
UMAG_10656DNA primase; Belongs to the eukaryotic-type primase small subunit family. (492 aa)
UMAG_05156Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (623 aa)
UMAG_01458DNA polymerase. (1057 aa)
UMAG_01679DNA helicase. (906 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (846 aa)
UMAG_06131Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (551 aa)
UMAG_04623Putative replication factor C subunit 3. (341 aa)
UMAG_05028Chromosome 15, whole genome shotgun sequence. (1454 aa)
UMAG_04529DNA polymerase. (1667 aa)
UMAG_05403Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (289 aa)
UMAG_04165Chromosome 12, whole genome shotgun sequence. (114 aa)
UMAG_03766Chromosome 10, whole genome shotgun sequence. (559 aa)
UMAG_03852DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (543 aa)
UMAG_02557DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (764 aa)
UMAG_02760DNA_pol_E_B domain-containing protein. (632 aa)
UMAG_01445DNA helicase; Belongs to the MCM family. (961 aa)
UMAG_10765Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (343 aa)
UMAG_01646DNA helicase; Belongs to the MCM family. (1020 aa)
UMAG_02579Uncharacterized protein. (285 aa)
UMAG_00216Chromosome 1, whole genome shotgun sequence. (384 aa)
UMAG_00366DNA helicase; Belongs to the MCM family. (980 aa)
UMAG_01790Uncharacterized protein. (804 aa)
UMAG_00729Chromosome 1, whole genome shotgun sequence. (343 aa)
UMAG_00527Chromosome 1, whole genome shotgun sequence. (170 aa)
UMAG_05207CBFD_NFYB_HMF domain-containing protein. (250 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (374 aa)
POL2DNA polymerase epsilon catalytic subunit A; DNA polymerase II participates in chromosomal DNA replication. (2305 aa)
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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