STRINGSTRING
UMAG_15027 UMAG_15027 UMAG_01262 UMAG_01262 UMAG_11196 UMAG_11196 UMAG_04976 UMAG_04976 UMAG_04669 UMAG_04669 UMAG_01458 UMAG_01458 UMAG_05403 UMAG_05403 UMAG_11521 UMAG_11521 UMAG_03766 UMAG_03766 UMAG_10845 UMAG_10845 NTH1 NTH1 UMAG_02760 UMAG_02760 UNG1 UNG1 UMAG_01304 UMAG_01304 UMAG_00380 UMAG_00380 UMAG_01790 UMAG_01790 UMAG_00599 UMAG_00599 UMAG_10924 UMAG_10924 UMAG_00308 UMAG_00308 UMAG_00527 UMAG_00527 UMAG_05207 UMAG_05207 FEN1 FEN1 POL2 POL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UMAG_15027Chromosome 21, whole genome shotgun sequence. (363 aa)
UMAG_01262Putative DNA polymerase X. (749 aa)
UMAG_11196DNA ligase. (851 aa)
UMAG_04976Chromosome 15, whole genome shotgun sequence. (510 aa)
UMAG_04669DNA_LIGASE_A3 domain-containing protein. (1068 aa)
UMAG_01458DNA polymerase. (1057 aa)
UMAG_05403Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (289 aa)
UMAG_11521Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (619 aa)
UMAG_03766Chromosome 10, whole genome shotgun sequence. (559 aa)
UMAG_10845UDG domain-containing protein. (511 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (562 aa)
UMAG_02760DNA_pol_E_B domain-containing protein. (632 aa)
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (444 aa)
UMAG_01304ENDO3c domain-containing protein. (569 aa)
UMAG_00380Chromosome 1, whole genome shotgun sequence. (447 aa)
UMAG_01790Uncharacterized protein. (804 aa)
UMAG_00599DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (616 aa)
UMAG_10924DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (744 aa)
UMAG_00308Chromosome 1, whole genome shotgun sequence. (552 aa)
UMAG_00527Chromosome 1, whole genome shotgun sequence. (170 aa)
UMAG_05207CBFD_NFYB_HMF domain-containing protein. (250 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (374 aa)
POL2DNA polymerase epsilon catalytic subunit A; DNA polymerase II participates in chromosomal DNA replication. (2305 aa)
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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