STRINGSTRING
UMAG_04151 UMAG_04151 UMAG_05228 UMAG_05228 UMAG_00920 UMAG_00920 UMAG_11196 UMAG_11196 UMAG_10751 UMAG_10751 UMAG_10917 UMAG_10917 UMAG_11163 UMAG_11163 UMAG_04976 UMAG_04976 UMAG_04669 UMAG_04669 UMAG_04069 UMAG_04069 UMAG_03434 UMAG_03434 UMAG_05151 UMAG_05151 UMAG_05156 UMAG_05156 UMAG_06296 UMAG_06296 UMAG_01458 UMAG_01458 UMAG_00669 UMAG_00669 UMAG_06219 UMAG_06219 UMAG_05563 UMAG_05563 UMAG_10551 UMAG_10551 UMAG_04902 UMAG_04902 UMAG_04623 UMAG_04623 UMAG_03898 UMAG_03898 UMAG_05403 UMAG_05403 UMAG_04165 UMAG_04165 UMAG_10396 UMAG_10396 UMAG_03766 UMAG_03766 UMAG_02760 UMAG_02760 UMAG_10604 UMAG_10604 UMAG_11724 UMAG_11724 UMAG_02579 UMAG_02579 UMAG_00922 UMAG_00922 UMAG_00216 UMAG_00216 UMAG_01691 UMAG_01691 UMAG_01790 UMAG_01790 UMAG_00729 UMAG_00729 UMAG_00527 UMAG_00527 UMAG_05207 UMAG_05207 TFB5 TFB5 POL2 POL2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UMAG_04151Chromosome 12, whole genome shotgun sequence. (850 aa)
UMAG_05228Uncharacterized protein. (447 aa)
UMAG_00920Putative DNA replication factor C subunit protein. (353 aa)
UMAG_11196DNA ligase. (851 aa)
UMAG_10751BSD domain-containing protein. (679 aa)
UMAG_10917Chromosome 16, whole genome shotgun sequence. (106 aa)
UMAG_11163Chromosome 15, whole genome shotgun sequence. (921 aa)
UMAG_04976Chromosome 15, whole genome shotgun sequence. (510 aa)
UMAG_04669DNA_LIGASE_A3 domain-containing protein. (1068 aa)
UMAG_04069Putative TFIIH/NER complex ATPase/helicase subunit SSL2. (940 aa)
UMAG_03434Replication factor C subunit 1. (950 aa)
UMAG_05151CYCLIN domain-containing protein; Belongs to the cyclin family. (493 aa)
UMAG_05156Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (623 aa)
UMAG_06296RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (491 aa)
UMAG_01458DNA polymerase. (1057 aa)
UMAG_00669Chromosome 1, whole genome shotgun sequence. (401 aa)
UMAG_06219Uncharacterized protein. (334 aa)
UMAG_05563CULLIN_2 domain-containing protein; Belongs to the cullin family. (822 aa)
UMAG_10551General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (516 aa)
UMAG_04902Chromosome 15, whole genome shotgun sequence; Belongs to the protein kinase superfamily. (379 aa)
UMAG_04623Putative replication factor C subunit 3. (341 aa)
UMAG_03898Uncharacterized protein. (1532 aa)
UMAG_05403Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (289 aa)
UMAG_04165Chromosome 12, whole genome shotgun sequence. (114 aa)
UMAG_10396Chromosome 8, whole genome shotgun sequence. (993 aa)
UMAG_03766Chromosome 10, whole genome shotgun sequence. (559 aa)
UMAG_02760DNA_pol_E_B domain-containing protein. (632 aa)
UMAG_10604CPSF_A domain-containing protein. (1511 aa)
UMAG_11724XPA_C domain-containing protein. (356 aa)
UMAG_02579Uncharacterized protein. (285 aa)
UMAG_00922Uncharacterized protein. (422 aa)
UMAG_00216Chromosome 1, whole genome shotgun sequence. (384 aa)
UMAG_01691Uncharacterized protein. (1176 aa)
UMAG_01790Uncharacterized protein. (804 aa)
UMAG_00729Chromosome 1, whole genome shotgun sequence. (343 aa)
UMAG_00527Chromosome 1, whole genome shotgun sequence. (170 aa)
UMAG_05207CBFD_NFYB_HMF domain-containing protein. (250 aa)
TFB5General transcription and DNA repair factor IIH subunit TFB5; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II. In NER, TFIIH acts by opening DNA around the lesion to allow the excision of the damaged oligonucleotide and its replacement by a new DNA fragment. In transcription, TFIIH has an essential role in transcription initiation. When the pre-initiation complex (PIC) has be [...] (65 aa)
POL2DNA polymerase epsilon catalytic subunit A; DNA polymerase II participates in chromosomal DNA replication. (2305 aa)
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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