38 items (Collichthys lucidus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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Your Input:
	D9C73_004320	Paraplegin. (811 aa)
	D9C73_025391	Vesicle-fusing ATPase. (744 aa)
	D9C73_024436	ATPase family AAA domain-containing protein 1-B; Belongs to the AAA ATPase family. (329 aa)
	D9C73_025180	26S proteasome regulatory subunit 7 26S proteasome AAA-ATPase subunit RPT1; Belongs to the AAA ATPase family. (433 aa)
	D9C73_024431	ATPase family AAA domain-containing protein 1-B; Belongs to the AAA ATPase family. (303 aa)
	D9C73_023575	Vesicle-fusing ATPase; Belongs to the AAA ATPase family. (549 aa)
	D9C73_022354	ATPase family AAA domain-containing protein 2. (1223 aa)
	D9C73_023562	Vesicle-fusing ATPase. (747 aa)
	D9C73_023091	Peroxisome biogenesis factor 1. (1133 aa)
	D9C73_021652	ATP-dependent zinc metalloprotease YME1L1. (748 aa)
	D9C73_021572	ATP-dependent zinc metalloprotease YME1L1. (731 aa)
	D9C73_020175	Nuclear valosin-containing protein-like. (865 aa)
	KATNAL2-2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (521 aa)
	KATNAL2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (510 aa)
	D9C73_016509	26S proteasome regulatory subunit 6B 26S proteasome AAA-ATPase subunit RPT3; Belongs to the AAA ATPase family. (452 aa)
	D9C73_015837	ATPase family AAA domain-containing protein 2. (1472 aa)
	D9C73_013560	ATP-dependent zinc metalloprotease YME1L1; Belongs to the AAA ATPase family. (682 aa)
	KATNA1	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (512 aa)
	D9C73_003067	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (590 aa)
	D9C73_003094	Transitional endoplasmic reticulum ATPase. (808 aa)
	D9C73_003659	Spermatogenesis-associated protein 5-like protein 1. (748 aa)
	D9C73_004025	26S proteasome regulatory subunit 6A 26S proteasome AAA-ATPase subunit RPT5; Belongs to the AAA ATPase family. (427 aa)
	D9C73_008160	Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family. (436 aa)
	D9C73_009136	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (456 aa)
	D9C73_007956	AFG3-like protein 1. (765 aa)
	D9C73_009968	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
	D9C73_012377	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (806 aa)
	D9C73_014542	AFG3-like protein 2; Belongs to the AAA ATPase family. (520 aa)
	D9C73_014533	AFG3-like protein 2. (921 aa)
	D9C73_013976	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (477 aa)
	D9C73_013553	ATP-dependent zinc metalloprotease YME1L1. (1002 aa)
	D9C73_019976	Spastin; Belongs to the AAA ATPase family. (461 aa)
	D9C73_010137	26S proteasome regulatory subunit 10B 26S proteasome AAA-ATPase subunit RPT4; Belongs to the AAA ATPase family. (328 aa)
	D9C73_020030	Fidgetin-like protein 1; Belongs to the AAA ATPase family. (648 aa)
	D9C73_009927	ATPase family AAA domain-containing protein 2B. (1447 aa)
	KATNA1-2	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (491 aa)
	D9C73_013233	ATPase family AAA domain-containing protein 1-A; Belongs to the AAA ATPase family. (364 aa)
	D9C73_006145	Spermatogenesis-associated protein 5. (901 aa)

Your Current Organism:

Collichthys lucidus

NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D9C73_003067	D9C73_004025	A0A4U5U498	A0A4U5U7X8	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit 6A 26S proteasome AAA-ATPase subunit RPT5; Belongs to the AAA ATPase family.	0.818
D9C73_003067	D9C73_008160	A0A4U5U498	A0A4U5UHM3	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.	0.423
D9C73_003067	D9C73_009136	A0A4U5U498	A0A4U5UJW2	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	0.428
D9C73_003067	D9C73_009927	A0A4U5U498	A0A4V6AS34	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	ATPase family AAA domain-containing protein 2B.	0.619
D9C73_003067	D9C73_009968	A0A4U5U498	A0A4U5UNA7	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit 4; Belongs to the AAA ATPase family.	0.817
D9C73_003067	D9C73_010137	A0A4U5U498	A0A4V6XYM9	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit 10B 26S proteasome AAA-ATPase subunit RPT4; Belongs to the AAA ATPase family.	0.753
D9C73_003067	D9C73_013976	A0A4U5U498	A0A4U5UWZ3	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	0.427
D9C73_003067	D9C73_015837	A0A4U5U498	A0A4U5V3C9	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	ATPase family AAA domain-containing protein 2.	0.619
D9C73_003067	D9C73_016509	A0A4U5U498	A0A4U5V561	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit 6B 26S proteasome AAA-ATPase subunit RPT3; Belongs to the AAA ATPase family.	0.786
D9C73_003067	D9C73_020175	A0A4U5U498	A0A4U5VBE3	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Nuclear valosin-containing protein-like.	0.644
D9C73_003067	D9C73_022354	A0A4U5U498	A0A4U5VPW7	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	ATPase family AAA domain-containing protein 2.	0.619
D9C73_003067	D9C73_025180	A0A4U5U498	A0A4U5VR48	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit 7 26S proteasome AAA-ATPase subunit RPT1; Belongs to the AAA ATPase family.	0.773
D9C73_003067	KATNA1	A0A4U5U498	A0A4U5TYZ0	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.467
D9C73_003067	KATNA1-2	A0A4U5U498	A0A4V6AS25	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.498
D9C73_003067	KATNAL2	A0A4U5U498	A0A4U5V8L1	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.533
D9C73_003067	KATNAL2-2	A0A4U5U498	A0A4U5V8W0	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.533
D9C73_003094	D9C73_004025	A0A4U5U5B2	A0A4U5U7X8	Transitional endoplasmic reticulum ATPase.	26S proteasome regulatory subunit 6A 26S proteasome AAA-ATPase subunit RPT5; Belongs to the AAA ATPase family.	0.815
D9C73_003094	D9C73_008160	A0A4U5U5B2	A0A4U5UHM3	Transitional endoplasmic reticulum ATPase.	Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.	0.418
D9C73_003094	D9C73_009136	A0A4U5U5B2	A0A4U5UJW2	Transitional endoplasmic reticulum ATPase.	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	0.423
D9C73_003094	D9C73_009927	A0A4U5U5B2	A0A4V6AS34	Transitional endoplasmic reticulum ATPase.	ATPase family AAA domain-containing protein 2B.	0.619