(35 nodes) Lissencephaly type-1-like homology motif network (Collichthys lucidus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D9C73_020934	Single-stranded DNA-binding protein 3. (449 aa)
	D9C73_001538	Oral-facial-digital syndrome 1 protein-like protein. (1261 aa)
	D9C73_001547	Oral-facial-digital syndrome 1 protein-like protein. (1029 aa)
	D9C73_001556	F-box-like/WD repeat-containing protein TBL1X. (524 aa)
	D9C73_002262	WD40 repeat-containing protein SMU1. (493 aa)
	D9C73_003187	TFIID subunit 5 Transcription initiation factor. (750 aa)
	D9C73_006478	Transmembrane and coiled-coil domain-containing protein 6. (1157 aa)
	D9C73_006881	WD40 repeat-containing protein SMU1. (513 aa)
	D9C73_006900	Macrophage erythroblast attacher. (396 aa)
	D9C73_007117	Ran-binding protein 10. (437 aa)
	D9C73_006865	WD40 repeat-containing protein SMU1. (529 aa)
	D9C73_006652	Protein RMD5-like protein B. (391 aa)
	D9C73_008480	WD repeat-containing protein 47. (829 aa)
	D9C73_008590	Single-stranded DNA-binding protein 3. (383 aa)
	D9C73_008492	LisH domain-containing protein ARMC9. (847 aa)
	D9C73_008236	F-box-like/WD repeat-containing protein TBL1XR1. (515 aa)
	D9C73_008568	Single-stranded DNA-binding protein 3. (382 aa)
	D9C73_009855	WD repeat-containing protein 26. (607 aa)
	D9C73_011818	Glucose-induced degradation protein 8-like protein. (228 aa)
	D9C73_011828	DDB1-and CUL4-associated factor 1. (1708 aa)
	D9C73_012342	Single-stranded DNA-binding protein 2. (339 aa)
	D9C73_014430	Ran-binding protein 9. (604 aa)
	D9C73_014380	LisH domain-containing protein. (879 aa)
	D9C73_014350	LisH domain-containing protein. (845 aa)
	D9C73_013644	F-box-like/WD repeat-containing protein TBL1XR1. (477 aa)
	D9C73_015349	Protein NPAT. (346 aa)
	PAFAH1B1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	KATNAL2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (510 aa)
	KATNAL2-2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (521 aa)
	D9C73_019939	Nucleolar and coiled-body phosphoprotein 1. (973 aa)
	D9C73_022007	LisH domain and HEAT repeat-containing protein KIAA1468-like protein. (1188 aa)
	D9C73_025163	Muskelin. (842 aa)
	D9C73_010942	Glucose-induced degradation protein 8-like protein. (229 aa)
	D9C73_014438	Ran-binding protein 9. (490 aa)
	D9C73_010912	Glucose-induced degradation protein 8-like protein. (229 aa)

Your Current Organism:

Collichthys lucidus

NCBI taxonomy Id: 240159
Other names: C. lucidus, Sciaena lucida, big head croaker

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D9C73_001538	KATNAL2	A0A4U5TZZ7	A0A4U5V8L1	Oral-facial-digital syndrome 1 protein-like protein.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.447
D9C73_001538	KATNAL2-2	A0A4U5TZZ7	A0A4U5V8W0	Oral-facial-digital syndrome 1 protein-like protein.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.447
D9C73_001547	KATNAL2	A0A4U5U037	A0A4U5V8L1	Oral-facial-digital syndrome 1 protein-like protein.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.447
D9C73_001547	KATNAL2-2	A0A4U5U037	A0A4U5V8W0	Oral-facial-digital syndrome 1 protein-like protein.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.447
D9C73_001556	D9C73_008236	A0A4U5U1C3	A0A4U5UKY8	F-box-like/WD repeat-containing protein TBL1X.	F-box-like/WD repeat-containing protein TBL1XR1.	0.828
D9C73_001556	D9C73_013644	A0A4U5U1C3	A0A4U5UXW4	F-box-like/WD repeat-containing protein TBL1X.	F-box-like/WD repeat-containing protein TBL1XR1.	0.828
D9C73_001556	D9C73_019939	A0A4U5U1C3	A0A4U5VBE4	F-box-like/WD repeat-containing protein TBL1X.	Nucleolar and coiled-body phosphoprotein 1.	0.424
D9C73_001556	KATNAL2	A0A4U5U1C3	A0A4U5V8L1	F-box-like/WD repeat-containing protein TBL1X.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.413
D9C73_001556	KATNAL2-2	A0A4U5U1C3	A0A4U5V8W0	F-box-like/WD repeat-containing protein TBL1X.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.413
D9C73_003187	KATNAL2	A0A4U5U4K9	A0A4U5V8L1	TFIID subunit 5 Transcription initiation factor.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.415
D9C73_003187	KATNAL2-2	A0A4U5U4K9	A0A4U5V8W0	TFIID subunit 5 Transcription initiation factor.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.415
D9C73_003187	PAFAH1B1	A0A4U5U4K9	A0A4U5V128	TFIID subunit 5 Transcription initiation factor.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.	0.497
D9C73_006652	D9C73_006900	A0A4U5UGQ0	A0A4U5UE13	Protein RMD5-like protein B.	Macrophage erythroblast attacher.	0.801
D9C73_006652	D9C73_007117	A0A4U5UGQ0	A0A4U5UEY4	Protein RMD5-like protein B.	Ran-binding protein 10.	0.939
D9C73_006652	D9C73_009855	A0A4U5UGQ0	A0A4U5UM42	Protein RMD5-like protein B.	WD repeat-containing protein 26.	0.957
D9C73_006652	D9C73_010912	A0A4U5UGQ0	A0A4V6AQD0	Protein RMD5-like protein B.	Glucose-induced degradation protein 8-like protein.	0.932
D9C73_006652	D9C73_010942	A0A4U5UGQ0	A0A4V6API3	Protein RMD5-like protein B.	Glucose-induced degradation protein 8-like protein.	0.932
D9C73_006652	D9C73_011818	A0A4U5UGQ0	A0A4U5URJ7	Protein RMD5-like protein B.	Glucose-induced degradation protein 8-like protein.	0.932
D9C73_006652	D9C73_014430	A0A4U5UGQ0	A0A4U5UXB3	Protein RMD5-like protein B.	Ran-binding protein 9.	0.938
D9C73_006652	D9C73_014438	A0A4U5UGQ0	A0A4V6AQ74	Protein RMD5-like protein B.	Ran-binding protein 9.	0.942