85 items (Coprinopsis cinerea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CC1G_12286	ULP_PROTEASE domain-containing protein. (1290 aa)
	CC1G_13291	CxC1 domain-containing protein. (715 aa)
	CC1G_02769	Uncharacterized protein. (1641 aa)
	CC1G_08638	Uncharacterized protein. (408 aa)
	CC1G_08646	Uncharacterized protein. (507 aa)
	CC1G_00558	TPR_REGION domain-containing protein. (557 aa)
	CC1G_00656	Uncharacterized protein. (431 aa)
	CC1G_06026	Uncharacterized protein. (277 aa)
	CC1G_04593	Uncharacterized protein. (529 aa)
	CC1G_04456	Uncharacterized protein. (562 aa)
	CC1G_09334	Uncharacterized protein. (231 aa)
	CC1G_12955	Uncharacterized protein. (347 aa)
	CC1G_04014	Uncharacterized protein. (950 aa)
	CC1G_05768	Uncharacterized protein. (341 aa)
	CC1G_05880	CxC2 domain-containing protein. (1061 aa)
	CC1G_09387	Uncharacterized protein. (325 aa)
	CC1G_03480	ULP_PROTEASE domain-containing protein. (1376 aa)
	CC1G_08508	Uncharacterized protein. (473 aa)
	CC1G_01022	Uncharacterized protein. (640 aa)
	CC1G_11047	ULP_PROTEASE domain-containing protein. (1346 aa)
	CC1G_11723	Uncharacterized protein. (935 aa)
	CC1G_12213	Uncharacterized protein. (436 aa)
	CC1G_10774	Uncharacterized protein. (212 aa)
	CC1G_10780	Uncharacterized protein. (307 aa)
	CC1G_10800	Uncharacterized protein. (976 aa)
	CC1G_11482	Uncharacterized protein. (519 aa)
	CC1G_07770	Uncharacterized protein. (497 aa)
	CC1G_07773	Uncharacterized protein. (318 aa)
	CC1G_10233	Uncharacterized protein. (620 aa)
	CC1G_12623	Uncharacterized protein. (189 aa)
	CC1G_07557	Uncharacterized protein. (210 aa)
	CC1G_04090	Uncharacterized protein. (301 aa)
	CC1G_04106	Uncharacterized protein. (476 aa)
	CC1G_04133	ATP-dependent DNA helicase; Belongs to the helicase family. (1213 aa)
	CC1G_04150	Uncharacterized protein. (316 aa)
	CC1G_00242	Uncharacterized protein. (1114 aa)
	CC1G_12745	CxC1 domain-containing protein. (1018 aa)
	CC1G_08706	Uncharacterized protein. (166 aa)
	CC1G_09541	Uncharacterized protein. (980 aa)
	CC1G_13301	Uncharacterized protein. (530 aa)
	CC1G_13139	Uncharacterized protein. (502 aa)
	CC1G_04816	Uncharacterized protein. (310 aa)
	CC1G_12403	CxC2 domain-containing protein. (796 aa)
	CC1G_12470	Uncharacterized protein. (440 aa)
	CC1G_13031	Uncharacterized protein. (811 aa)
	CC1G_10905	Uncharacterized protein. (1036 aa)
	CC1G_10588	Uncharacterized protein. (354 aa)
	CC1G_11343	Helitron_like_N domain-containing protein. (749 aa)
	CC1G_11347	Uncharacterized protein. (294 aa)
	CC1G_09553	ULP_PROTEASE domain-containing protein. (1354 aa)
	CC1G_09679	Uncharacterized protein. (308 aa)
	CC1G_09683	Helitron_like_N domain-containing protein. (781 aa)
	CC1G_09684	Uncharacterized protein. (559 aa)
	CC1G_12593	Uncharacterized protein. (544 aa)
	CC1G_06101	Uncharacterized protein. (1415 aa)
	CC1G_06106	Uncharacterized protein. (471 aa)
	CC1G_06116	ULP_PROTEASE domain-containing protein. (1400 aa)
	CC1G_07219	Uncharacterized protein. (1287 aa)
	CC1G_07224	CxC1 domain-containing protein. (1257 aa)
	CC1G_07273	Uncharacterized protein. (1239 aa)
	CC1G_12824	Uncharacterized protein. (422 aa)
	CC1G_09766	Uncharacterized protein. (1270 aa)
	CC1G_09780	Uncharacterized protein. (313 aa)
	CC1G_10374	Uncharacterized protein. (1164 aa)
	CC1G_10140	Helitron_like_N domain-containing protein. (278 aa)
	CC1G_10143	Uncharacterized protein. (322 aa)
	CC1G_12987	Uncharacterized protein. (274 aa)
	CC1G_13027	Uncharacterized protein. (139 aa)
	CC1G_13028	Uncharacterized protein. (395 aa)
	CC1G_12783	Uncharacterized protein. (826 aa)
	CC1G_13673	Uncharacterized protein. (361 aa)
	CC1G_13550	ULP_PROTEASE domain-containing protein. (531 aa)
	CC1G_14303	Uncharacterized protein. (424 aa)
	CC1G_14504	ULP_PROTEASE domain-containing protein. (1065 aa)
	CC1G_14357	Uncharacterized protein. (1128 aa)
	CC1G_14733	Uncharacterized protein. (606 aa)
	CC1G_15624	CxC1 domain-containing protein. (1024 aa)
	CC1G_14753	Uncharacterized protein. (235 aa)
	CC1G_15066	Uncharacterized protein. (131 aa)
	CC1G_15154	Uncharacterized protein. (390 aa)
	CC1G_15352	Ubiquitin and ribosomal protein S27a. (1393 aa)
	CC1G_15371	Uncharacterized protein. (1163 aa)
	CC1G_15459	Uncharacterized protein. (649 aa)
	CC1G_15460	Uncharacterized protein. (491 aa)
	CC1G_15464	C2H2-type domain-containing protein. (967 aa)

Your Current Organism:

Coprinopsis cinerea

NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130

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... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC1G_00242	CC1G_00558	A8NX97	A8N3D4	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.401
CC1G_00558	CC1G_00242	A8N3D4	A8NX97	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.401
CC1G_02769	CC1G_07219	A8MZZ8	A8PCY9	Uncharacterized protein.	Uncharacterized protein.	0.412
CC1G_02769	CC1G_08638	A8MZZ8	A8N0U1	Uncharacterized protein.	Uncharacterized protein.	0.410
CC1G_02769	CC1G_11482	A8MZZ8	A8NMR0	Uncharacterized protein.	Uncharacterized protein.	0.442
CC1G_02769	CC1G_13550	A8MZZ8	D6RJZ4	Uncharacterized protein.	ULP_PROTEASE domain-containing protein.	0.520
CC1G_03480	CC1G_08638	A8NCC2	A8N0U1	ULP_PROTEASE domain-containing protein.	Uncharacterized protein.	0.415
CC1G_03480	CC1G_11482	A8NCC2	A8NMR0	ULP_PROTEASE domain-containing protein.	Uncharacterized protein.	0.412
CC1G_04090	CC1G_10774	A8NVY0	A8NME9	Uncharacterized protein.	Uncharacterized protein.	0.498
CC1G_04090	CC1G_14753	A8NVY0	D6RNL6	Uncharacterized protein.	Uncharacterized protein.	0.502
CC1G_04150	CC1G_04456	A8NW60	A8N574	Uncharacterized protein.	Uncharacterized protein.	0.443
CC1G_04150	CC1G_07770	A8NW60	A8NNZ0	Uncharacterized protein.	Uncharacterized protein.	0.413
CC1G_04150	CC1G_10774	A8NW60	A8NME9	Uncharacterized protein.	Uncharacterized protein.	0.503
CC1G_04150	CC1G_13027	A8NW60	A8PGU6	Uncharacterized protein.	Uncharacterized protein.	0.429
CC1G_04150	CC1G_14753	A8NW60	D6RNL6	Uncharacterized protein.	Uncharacterized protein.	0.504
CC1G_04456	CC1G_04150	A8N574	A8NW60	Uncharacterized protein.	Uncharacterized protein.	0.443
CC1G_04456	CC1G_04816	A8N574	A8P2N8	Uncharacterized protein.	Uncharacterized protein.	0.431
CC1G_04456	CC1G_07557	A8N574	A8NUK2	Uncharacterized protein.	Uncharacterized protein.	0.424
CC1G_04456	CC1G_07773	A8N574	A8NNZ5	Uncharacterized protein.	Uncharacterized protein.	0.484
CC1G_04456	CC1G_09679	A8N574	A8P9H9	Uncharacterized protein.	Uncharacterized protein.	0.466