Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| COP4 | COP6 | A8NU13 | A8NCK5 | Linoleate 10R-lipoxygenase COP4; Sesquiterpene synthase that catalyzes the cyclization of farnesyl diphosphate (FPP) into multiple products, including germacrene D, beta-copaene, beta-cubebene, (+)-sativene and cubebol, a natural sesquiterpene alcohol used in the food industry for its cooling and refreshing taste. Terpenoid hydrocarbons resulting from cyclization of farnesyl diphosphate are intermediates in the biosynthesis of biologically active compounds such as antibiotics, toxins and pheromones. | Alpha-cuprenene synthase COP6; Alpha-cuprenene synthase; part of the gene cluster that mediates the biosynthesis of alpha-cuprenene and oxidized derivatives. The alpha-cuprenene synthase COP6 is the only sesquiterpene synthase identified in C.cinereus that appears to be part of a biosynthetic gene cluster and is highly specific since it catalyzes the cyclization of (2E,6E)-farnesyl diphosphate into only one product, alpha-cuprenene. COP6 is also able to perform the cyclization of geranyl diphosphate. The cytochrome P450 monooxygenase COX2 then oxidizes the cyclohexadiene ring of alpha- [...] | 0.485 |
| COP6 | COP4 | A8NCK5 | A8NU13 | Alpha-cuprenene synthase COP6; Alpha-cuprenene synthase; part of the gene cluster that mediates the biosynthesis of alpha-cuprenene and oxidized derivatives. The alpha-cuprenene synthase COP6 is the only sesquiterpene synthase identified in C.cinereus that appears to be part of a biosynthetic gene cluster and is highly specific since it catalyzes the cyclization of (2E,6E)-farnesyl diphosphate into only one product, alpha-cuprenene. COP6 is also able to perform the cyclization of geranyl diphosphate. The cytochrome P450 monooxygenase COX2 then oxidizes the cyclohexadiene ring of alpha- [...] | Linoleate 10R-lipoxygenase COP4; Sesquiterpene synthase that catalyzes the cyclization of farnesyl diphosphate (FPP) into multiple products, including germacrene D, beta-copaene, beta-cubebene, (+)-sativene and cubebol, a natural sesquiterpene alcohol used in the food industry for its cooling and refreshing taste. Terpenoid hydrocarbons resulting from cyclization of farnesyl diphosphate are intermediates in the biosynthesis of biologically active compounds such as antibiotics, toxins and pheromones. | 0.485 |