(40 nodes) Phagophore assembly site, and 2OG-Fe(II) oxygenase superfamily network (Coprinopsis cinerea)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TVP23	Golgi apparatus membrane protein TVP23; Golgi membrane protein involved in vesicular trafficking. Belongs to the TVP23 family. (254 aa)
	CC1G_03709	ATG16 domain-containing protein. (249 aa)
	CC1G_03741	Uncharacterized protein. (430 aa)
	CC1G_01866	TBC1 domain family member 14. (652 aa)
	CC1G_08773	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (352 aa)
	CC1G_11818	CEL6 protein. (754 aa)
	CC1G_01942	Beclin 1 protein. (488 aa)
	CC1G_07407	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (364 aa)
	CC1G_03334	Uncharacterized protein. (592 aa)
	CC1G_02298	Autophagy-related protein 3. (423 aa)
	CC1G_02380	Iron/ascorbate oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (365 aa)
	CC1G_09362	Other/FunK1 protein kinase. (584 aa)
	CC1G_02514	Other/FunK1 protein kinase. (681 aa)
	CC1G_02515	Other/FunK1 protein kinase. (620 aa)
	CC1G_07645	ATG11 domain-containing protein. (1399 aa)
	CC1G_10091	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (1006 aa)
	CC1G_01076	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (858 aa)
	CC1G_04213	Uncharacterized protein. (1905 aa)
	CC1G_03820	Autophagy-related protein. (127 aa)
	CC1G_05797	Cysteine protease. (1034 aa)
	CC1G_11596	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (126 aa)
	CC1G_07785	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. (870 aa)
	CC1G_03401	2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (341 aa)
	CC1G_02929	Uncharacterized protein. (374 aa)
	CC1G_05056	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (361 aa)
	CC1G_06302	Phosphatidylinositol 3-kinase VPS34. (852 aa)
	CC1G_00211	SVP1-like protein 2. (453 aa)
	CC1G_08691	Other/VPS15 protein kinase. (1642 aa)
	CC1G_08986	Autophagy-type protein 18. (497 aa)
	CC1G_09643	Other/FunK1 protein kinase. (790 aa)
	CC1G_09646	Other/FunK1 protein kinase. (978 aa)
	CC1G_10438	Other/FunK1 protein kinase. (385 aa)
	CC1G_10443	Other/FunK1 protein kinase. (727 aa)
	CC1G_10350	Other/FunK1 protein kinase. (726 aa)
	CC1G_10165	Autophagy protein 7. (689 aa)
	CC1G_03132	Thymine dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (332 aa)
	CC1G_04934	Uncharacterized protein. (115 aa)
	CC1G_13675	Uncharacterized protein. (532 aa)
	CC1G_14418	Uncharacterized protein. (531 aa)
	CC1G_15592	Other/ULK/ULK protein kinase. (868 aa)

Your Current Organism:

Coprinopsis cinerea

NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC1G_00211	CC1G_01076	A8NX59	A8NEF7	SVP1-like protein 2.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.616
CC1G_00211	CC1G_01942	A8NX59	A8N615	SVP1-like protein 2.	Beclin 1 protein.	0.523
CC1G_00211	CC1G_03709	A8NX59	A8N216	SVP1-like protein 2.	ATG16 domain-containing protein.	0.448
CC1G_00211	CC1G_03820	A8NX59	A8NGU7	SVP1-like protein 2.	Autophagy-related protein.	0.479
CC1G_00211	CC1G_04213	A8NX59	A8NFA2	SVP1-like protein 2.	Uncharacterized protein.	0.780
CC1G_00211	CC1G_04934	A8NX59	A8PFL5	SVP1-like protein 2.	Uncharacterized protein.	0.478
CC1G_00211	CC1G_05797	A8NX59	A8NLD6	SVP1-like protein 2.	Cysteine protease.	0.453
CC1G_00211	CC1G_06302	A8NX59	A8NTF6	SVP1-like protein 2.	Phosphatidylinositol 3-kinase VPS34.	0.459
CC1G_00211	CC1G_07407	A8NX59	A8N6N6	SVP1-like protein 2.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.589
CC1G_00211	CC1G_07785	A8NX59	A8NP13	SVP1-like protein 2.	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	0.416
CC1G_00211	CC1G_08691	A8NX59	A8NZH1	SVP1-like protein 2.	Other/VPS15 protein kinase.	0.463
CC1G_00211	CC1G_08986	A8NX59	A8P4V5	SVP1-like protein 2.	Autophagy-type protein 18.	0.620
CC1G_00211	CC1G_10165	A8NX59	A8PEG6	SVP1-like protein 2.	Autophagy protein 7.	0.612
CC1G_00211	CC1G_11596	A8NX59	A8NMM2	SVP1-like protein 2.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.588
CC1G_00211	CC1G_15592	A8NX59	D6RN80	SVP1-like protein 2.	Other/ULK/ULK protein kinase.	0.424
CC1G_01076	CC1G_00211	A8NEF7	A8NX59	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	SVP1-like protein 2.	0.616
CC1G_01076	CC1G_01942	A8NEF7	A8N615	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Beclin 1 protein.	0.881
CC1G_01076	CC1G_02298	A8NEF7	A8N7P1	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Autophagy-related protein 3.	0.420
CC1G_01076	CC1G_02514	A8NEF7	A8NBQ4	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Other/FunK1 protein kinase.	0.614
CC1G_01076	CC1G_02515	A8NEF7	A8NBQ5	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Other/FunK1 protein kinase.	0.614