STRINGSTRING
CC1G_04827 CC1G_04827 CC1G_04609 CC1G_04609 CC1G_02028 CC1G_02028 CC1G_09276 CC1G_09276 CC1G_03978 CC1G_03978 CC1G_07623 CC1G_07623 CC1G_07765 CC1G_07765 CC1G_12378 CC1G_12378 CC1G_10414 CC1G_10414 CC1G_04826 CC1G_04826 CC1G_14136 CC1G_14136
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CC1G_04827Uncharacterized protein. (281 aa)
CC1G_04609Farnesyltranstransferase; Belongs to the FPP/GGPP synthase family. (325 aa)
CC1G_02028Uncharacterized protein. (290 aa)
CC1G_09276Uncharacterized protein. (295 aa)
CC1G_03978Squalene synthase. (514 aa)
CC1G_07623Uncharacterized protein. (207 aa)
CC1G_07765Uncharacterized protein. (411 aa)
CC1G_12378Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family. (424 aa)
CC1G_10414Uncharacterized protein. (272 aa)
CC1G_04826Uncharacterized protein. (286 aa)
CC1G_14136Uncharacterized protein. (339 aa)
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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