(14 nodes) Glutamine metabolic process network (Coprinopsis cinerea)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CC1G_04764	Aspartate carbamoyltransferase. (2212 aa)
	CC1G_11893	GMP synthase. (538 aa)
	CC1G_05482	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (632 aa)
	CC1G_06632	Glutamine amidotransferase subunit pdxT. (230 aa)
	CC1G_13933	Glutamate synthase. (2127 aa)
	CC1G_00362	Glutamine synthetase. (354 aa)
	CC1G_06482	Cytoplasmic protein. (343 aa)
	CC1G_03787	Nitrilase family protein. (275 aa)
	CC1G_11936	Asparagine synthase. (575 aa)
	CC1G_02524	L-glutamine D-fructose 6-phosphate amidotansferase. (695 aa)
	CC1G_11804	Phosphoribosylformylglycinamidine synthase. (1364 aa)
	CC1G_07378	Chitin-binding type-3 domain-containing protein. (322 aa)
	CC1G_02006	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. (825 aa)
	CC1G_10536	Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family. (556 aa)

Your Current Organism:

Coprinopsis cinerea

NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC1G_00362	CC1G_02006	D6RMX1	A8N699	Glutamine synthetase.	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	0.682
CC1G_00362	CC1G_02524	D6RMX1	A8NBR4	Glutamine synthetase.	L-glutamine D-fructose 6-phosphate amidotansferase.	0.937
CC1G_00362	CC1G_04764	D6RMX1	A8P2H2	Glutamine synthetase.	Aspartate carbamoyltransferase.	0.951
CC1G_00362	CC1G_05482	D6RMX1	A8P5F3	Glutamine synthetase.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.707
CC1G_00362	CC1G_06482	D6RMX1	A8NN98	Glutamine synthetase.	Cytoplasmic protein.	0.605
CC1G_00362	CC1G_06632	D6RMX1	A8P7T3	Glutamine synthetase.	Glutamine amidotransferase subunit pdxT.	0.582
CC1G_00362	CC1G_10536	D6RMX1	A8N1B5	Glutamine synthetase.	Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.	0.518
CC1G_00362	CC1G_11893	D6RMX1	A8P3K6	Glutamine synthetase.	GMP synthase.	0.594
CC1G_00362	CC1G_11936	D6RMX1	A8NFS7	Glutamine synthetase.	Asparagine synthase.	0.655
CC1G_00362	CC1G_13933	D6RMX1	D6RKP1	Glutamine synthetase.	Glutamate synthase.	0.980
CC1G_02006	CC1G_00362	A8N699	D6RMX1	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Glutamine synthetase.	0.682
CC1G_02006	CC1G_02524	A8N699	A8NBR4	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	L-glutamine D-fructose 6-phosphate amidotansferase.	0.645
CC1G_02006	CC1G_03787	A8N699	A8NGQ3	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Nitrilase family protein.	0.617
CC1G_02006	CC1G_04764	A8N699	A8P2H2	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Aspartate carbamoyltransferase.	0.706
CC1G_02006	CC1G_05482	A8N699	A8P5F3	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.719
CC1G_02006	CC1G_06482	A8N699	A8NN98	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Cytoplasmic protein.	0.727
CC1G_02006	CC1G_07378	A8N699	A8N6K7	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Chitin-binding type-3 domain-containing protein.	0.645
CC1G_02006	CC1G_10536	A8N699	A8N1B5	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. Belongs to the HisA/HisF family.	0.896
CC1G_02006	CC1G_11804	A8N699	A8N811	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	Phosphoribosylformylglycinamidine synthase.	0.666
CC1G_02006	CC1G_11893	A8N699	A8P3K6	Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.	GMP synthase.	0.673