34 items (Coprinopsis cinerea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CC1G_01338	NADH-ubiquinone oxidoreductase 23 kDa subunit. (245 aa)
	CC1G_00229	Uncharacterized protein. (79 aa)
	CC1G_00077	Uncharacterized protein. (61 aa)
	CC1G_06197	Succinate dehydrogenase cytochrome b560 subunit. (178 aa)
	CC1G_12418	Cytochrome c oxidase polypeptide IV. (154 aa)
	CC1G_12974	Complex I intermediate-associated protein CIA30. (253 aa)
	CC1G_06344	Uncharacterized protein. (185 aa)
	CC1G_01555	Ubiquinol-cytochrome C reductase complex core protein 2. (425 aa)
	CC1G_22010	Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (527 aa)
	CC1G_10278	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family. (127 aa)
	CC1G_10506	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (276 aa)
	CC1G_11299	NADH:ubiquinone oxidoreductase kDa subunit. (146 aa)
	CC1G_00725	NADH-ubiquinone oxidoreductase; Belongs to the complex I 49 kDa subunit family. (441 aa)
	CC1G_10112	Cytochrome-c oxidase chain VI. (137 aa)
	CC1G_06877	Uncharacterized protein. (74 aa)
	CC1G_00816	F-box domain-containing protein. (275 aa)
	CC1G_00883	Uncharacterized protein. (60 aa)
	CC1G_05743	Cytochrome c domain-containing protein. (329 aa)
	CC1G_03856	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (127 aa)
	CC1G_01520	UCR_hinge domain-containing protein. (360 aa)
	CC1G_22008	Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex. (269 aa)
	CC1G_14822	Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer. (156 aa)
	CC1G_08304	Uncharacterized protein. (183 aa)
	CC1G_02650	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. (165 aa)
	CC1G_02587	Uncharacterized protein. (79 aa)
	CC1G_06084	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (638 aa)
	CC1G_08867	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (155 aa)
	CC1G_09250	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (266 aa)
	CC1G_13336	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. (86 aa)
	CC1G_05637	F-box domain-containing protein. (545 aa)
	CC1G_10306	Uncharacterized protein. (103 aa)
	CC1G_08128	Uncharacterized protein. (67 aa)
	CC1G_01387	Uncharacterized protein; Belongs to the complex I LYR family. (115 aa)
	CC1G_01312	Tafazzin family protein; Belongs to the taffazin family. (228 aa)

Your Current Organism:

Coprinopsis cinerea

NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC1G_00077	CC1G_00229	A8NWN4	A8NX81	Uncharacterized protein.	Uncharacterized protein.	0.990
CC1G_00077	CC1G_00725	A8NWN4	A8N3G9	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Belongs to the complex I 49 kDa subunit family.	0.978
CC1G_00077	CC1G_00816	A8NWN4	A8N8U1	Uncharacterized protein.	F-box domain-containing protein.	0.974
CC1G_00077	CC1G_01338	A8NWN4	A8NYH0	Uncharacterized protein.	NADH-ubiquinone oxidoreductase 23 kDa subunit.	0.994
CC1G_00077	CC1G_01387	A8NWN4	A8NYN4	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.995
CC1G_00077	CC1G_01520	A8NWN4	A8NHW4	Uncharacterized protein.	UCR_hinge domain-containing protein.	0.993
CC1G_00077	CC1G_01555	A8NWN4	A8NI11	Uncharacterized protein.	Ubiquinol-cytochrome C reductase complex core protein 2.	0.999
CC1G_00077	CC1G_02587	A8NWN4	A8PB89	Uncharacterized protein.	Uncharacterized protein.	0.990
CC1G_00077	CC1G_02650	A8NWN4	A8PBH9	Uncharacterized protein.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.889
CC1G_00077	CC1G_03856	A8NWN4	A8NGZ7	Uncharacterized protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.999
CC1G_00077	CC1G_05637	A8NWN4	A8P1R0	Uncharacterized protein.	F-box domain-containing protein.	0.993
CC1G_00077	CC1G_05743	A8NWN4	A8NA16	Uncharacterized protein.	Cytochrome c domain-containing protein.	0.999
CC1G_00077	CC1G_06084	A8NWN4	A8PA35	Uncharacterized protein.	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.561
CC1G_00077	CC1G_06197	A8NWN4	A8NV65	Uncharacterized protein.	Succinate dehydrogenase cytochrome b560 subunit.	0.890
CC1G_00077	CC1G_06344	A8NWN4	A8NTL3	Uncharacterized protein.	Uncharacterized protein.	0.993
CC1G_00077	CC1G_06877	A8NWN4	A8N705	Uncharacterized protein.	Uncharacterized protein.	0.999
CC1G_00077	CC1G_08128	A8NWN4	A8NZ09	Uncharacterized protein.	Uncharacterized protein.	0.699
CC1G_00077	CC1G_08304	A8NWN4	A8PG70	Uncharacterized protein.	Uncharacterized protein.	0.995
CC1G_00077	CC1G_08867	A8NWN4	A8P6E5	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.996
CC1G_00077	CC1G_09250	A8NWN4	A8P545	Uncharacterized protein.	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).	0.834