STRINGSTRING
CC1G_08798 CC1G_08798 CC1G_04317 CC1G_04317 CC1G_12113 CC1G_12113 CC1G_06748 CC1G_06748 CC1G_12414 CC1G_12414 CC1G_00300 CC1G_00300 CC1G_00332 CC1G_00332
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CC1G_08798Metacaspase. (333 aa)
CC1G_04317Aspartate aminotransferase. (410 aa)
CC1G_12113Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (524 aa)
CC1G_06748Aspartate Aminotransferase. (426 aa)
CC1G_12414Metacaspase. (455 aa)
CC1G_00300Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (567 aa)
CC1G_00332Endopeptidase; Belongs to the peptidase A1 family. (411 aa)
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130
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