(28 nodes) Fatty acid metabolism network (Coprinopsis cinerea)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CC1G_13586	Short-chain dehydrogenase/reductase SDR. (286 aa)
	CC1G_13192	Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family. (461 aa)
	CC1G_11231	Long-chain acyl-CoA synthetase. (671 aa)
	CC1G_06579	Acyl-CoA desaturase 1. (255 aa)
	CC1G_02019	Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (339 aa)
	CC1G_02051	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (304 aa)
	CC1G_07370	Palmitoyl-protein thioesterase. (316 aa)
	CC1G_11544	Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...] (286 aa)
	CC1G_12895	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family. (408 aa)
	CC1G_03811	Acetyl-CoA synthetase. (566 aa)
	CC1G_01566	Fatty acid activator Faa4. (689 aa)
	CC1G_01568	Long-chain-fatty-acid-CoA-ligase. (689 aa)
	CC1G_06470	Acyl-CoA oxidase. (566 aa)
	CC1G_03449	Fatty acid desaturase. (441 aa)
	CC1G_06261	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (417 aa)
	CC1G_07064	Fatty acid synthetase alpha subunit. (3941 aa)
	CC1G_10032	Uncharacterized protein. (308 aa)
	CC1G_00086	Acyl-CoA dehydrogenase. (453 aa)
	CC1G_12152	Short-chain dehydrogenase/reductase SDR. (328 aa)
	CC1G_06115	Acyl-CoA synthetase. (699 aa)
	CC1G_13647	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (416 aa)
	CC1G_13937	Long-chain-fatty-acid-CoA ligase. (683 aa)
	CC1G_14616	Acetyl-CoA acetyltransferase. (689 aa)
	CC1G_14835	Acetyl CoA carboxylase. (2231 aa)
	CC1G_14862	Trans-2-enoyl-CoA reductase. (394 aa)
	CC1G_15249	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (677 aa)
	CC1G_15704	Delta 9-fatty acid desaturase. (2306 aa)
	CC1G_11588	Delta-9 fatty acid desaturase; Belongs to the cytochrome b5 family. (292 aa)

Your Current Organism:

Coprinopsis cinerea

NCBI taxonomy Id: 240176
Other names: C. cinerea okayama7#130, Coprinopsis cinerea okayama7#130, Coprinus cinereus okayama7#130

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CC1G_00086	CC1G_02051	A8NWP6	A8N6E7	Acyl-CoA dehydrogenase.	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.939
CC1G_00086	CC1G_06261	A8NWP6	A8NT92	Acyl-CoA dehydrogenase.	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.922
CC1G_00086	CC1G_06470	A8NWP6	A8NN80	Acyl-CoA dehydrogenase.	Acyl-CoA oxidase.	0.923
CC1G_00086	CC1G_11231	A8NWP6	A8N130	Acyl-CoA dehydrogenase.	Long-chain acyl-CoA synthetase.	0.412
CC1G_00086	CC1G_12895	A8NWP6	A8NAR8	Acyl-CoA dehydrogenase.	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.922
CC1G_00086	CC1G_13647	A8NWP6	D6RJP2	Acyl-CoA dehydrogenase.	3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.	0.922
CC1G_00086	CC1G_13937	A8NWP6	D6RKP5	Acyl-CoA dehydrogenase.	Long-chain-fatty-acid-CoA ligase.	0.412
CC1G_00086	CC1G_14616	A8NWP6	D6RMQ8	Acyl-CoA dehydrogenase.	Acetyl-CoA acetyltransferase.	0.928
CC1G_00086	CC1G_14862	A8NWP6	D6RNW7	Acyl-CoA dehydrogenase.	Trans-2-enoyl-CoA reductase.	0.909
CC1G_00086	CC1G_15249	A8NWP6	D6RQ74	Acyl-CoA dehydrogenase.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.931
CC1G_01566	CC1G_01568	A8NI26	A8NI28	Fatty acid activator Faa4.	Long-chain-fatty-acid-CoA-ligase.	0.901
CC1G_01566	CC1G_03811	A8NI26	A8NGT5	Fatty acid activator Faa4.	Acetyl-CoA synthetase.	0.929
CC1G_01566	CC1G_06115	A8NI26	A8PA78	Fatty acid activator Faa4.	Acyl-CoA synthetase.	0.902
CC1G_01566	CC1G_06470	A8NI26	A8NN80	Fatty acid activator Faa4.	Acyl-CoA oxidase.	0.559
CC1G_01566	CC1G_06579	A8NI26	A8N307	Fatty acid activator Faa4.	Acyl-CoA desaturase 1.	0.425
CC1G_01566	CC1G_07064	A8NI26	A8NUB3	Fatty acid activator Faa4.	Fatty acid synthetase alpha subunit.	0.908
CC1G_01566	CC1G_07370	A8NI26	A8N6J9	Fatty acid activator Faa4.	Palmitoyl-protein thioesterase.	0.916
CC1G_01566	CC1G_11231	A8NI26	A8N130	Fatty acid activator Faa4.	Long-chain acyl-CoA synthetase.	0.941
CC1G_01566	CC1G_11588	A8NI26	D6RQT1	Fatty acid activator Faa4.	Delta-9 fatty acid desaturase; Belongs to the cytochrome b5 family.	0.425
CC1G_01566	CC1G_13937	A8NI26	D6RKP5	Fatty acid activator Faa4.	Long-chain-fatty-acid-CoA ligase.	0.940