STRINGSTRING
Ava_2547 Ava_2547 Ava_2548 Ava_2548 Ava_3229 Ava_3229 Ava_3230 Ava_3230 Ava_3231 Ava_3231 Ava_3309 Ava_3309 Ava_3744 Ava_3744
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ava_25473-beta hydroxysteroid dehydrogenase/isomerase. (334 aa)
Ava_2548Transcriptional regulator, TetR family. (236 aa)
Ava_3229Conserved hypothetical protein. (112 aa)
Ava_3230HAD-superfamily hydrolase subfamily IIIA. (194 aa)
Ava_3231UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family. (326 aa)
Ava_3309Conserved hypothetical protein. (188 aa)
Ava_3744Conserved hypothetical protein. (296 aa)
Your Current Organism:
Trichormus variabilis
NCBI taxonomy Id: 240292
Other names: Anabaena flos-aquae A-37, Anabaena flos-aquae UTCC 67, Anabaena sp. CCALA 007, Anabaena sp. PCC 7937, Anabaena variabilis ATCC 29413, Anabaena variabilis IAM M-204, Anabaena variabilis NIES-2095, Anabaena variabilis UTCC 105, Nostoc sp. PCC 7937, T. variabilis ATCC 29413, Trichormus variabilis ATCC 29413
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