STRINGSTRING
Ava_0182 Ava_0182 Ava_0293 Ava_0293 Ava_0670 Ava_0670 Ava_0744 Ava_0744 Ava_1045 Ava_1045 Ava_1046 Ava_1046 Ava_1047 Ava_1047 Ava_1113 Ava_1113 Ava_1116 Ava_1116 Ava_1117 Ava_1117 Ava_1292 Ava_1292 Ava_1374 Ava_1374 Ava_1386 Ava_1386 Ava_1405 Ava_1405 Ava_1737 Ava_1737 Ava_1951 Ava_1951 Ava_1957 Ava_1957 Ava_2093 Ava_2093 fcl fcl gmd gmd Ava_2099 Ava_2099 Ava_2100 Ava_2100 Ava_2639 Ava_2639 Ava_2661 Ava_2661 Ava_2680 Ava_2680 Ava_3000 Ava_3000 Ava_3287 Ava_3287 Ava_3346 Ava_3346 Ava_3347 Ava_3347 Ava_3348 Ava_3348 Ava_3349 Ava_3349 Ava_3350 Ava_3350 Ava_3351 Ava_3351 Ava_3352 Ava_3352 Ava_3353 Ava_3353 Ava_3354 Ava_3354 Ava_3355 Ava_3355 Ava_3356 Ava_3356 Ava_3357 Ava_3357 Ava_3358 Ava_3358 Ava_3359 Ava_3359 Ava_3360 Ava_3360 cugP cugP gmd-2 gmd-2 Ava_3653 Ava_3653 Ava_3668 Ava_3668 Ava_4588 Ava_4588 Ava_4589 Ava_4589 Ava_4832 Ava_4832 Ava_4844 Ava_4844 Ava_4846 Ava_4846 Ava_4927 Ava_4927
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ava_0182Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domains I and III. (842 aa)
Ava_0293UDP-sulfoquinovose synthase. (384 aa)
Ava_0670Hypothetical protein. (156 aa)
Ava_0744Anti-Sigma-factor antagonist (STAS) and sugar transfersase. (351 aa)
Ava_1045Lipopolysaccharide biosynthesis. (736 aa)
Ava_1046Sugar transferase. (469 aa)
Ava_1047UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (336 aa)
Ava_1113dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (189 aa)
Ava_1116Lipopolysaccharide biosynthesis. (741 aa)
Ava_1117Sugar transferase. (257 aa)
Ava_1292Mannose-6-phosphate isomerase, type 2. (140 aa)
Ava_1374Sugar transferase. (476 aa)
Ava_1386Lipopolysaccharide biosynthesis. (734 aa)
Ava_1405Mannose-6-phosphate isomerase, type 2. (135 aa)
Ava_1737Phosphoglucomutase/phosphomannomutase. (475 aa)
Ava_1951Sugar transferase. (225 aa)
Ava_1957UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (332 aa)
Ava_2093Sugar transferase. (235 aa)
fcl3-beta hydroxysteroid dehydrogenase/isomerase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (314 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (344 aa)
Ava_2099Sugar transferase. (252 aa)
Ava_2100Glycosyl transferase, group 1. (381 aa)
Ava_2639dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (356 aa)
Ava_2661Conserved hypothetical protein. (684 aa)
Ava_2680Mannose-1-phosphate guanylyltransferase (GDP). (354 aa)
Ava_3000Transferase hexapeptide repeat protein. (231 aa)
Ava_3287Polysaccharide export protein. (492 aa)
Ava_3346ABC-2. (268 aa)
Ava_3347ABC transporter-like protein. (246 aa)
Ava_3348Glycosyl transferase, family 2. (1074 aa)
Ava_3349Glycosyl transferase, group 1. (406 aa)
Ava_3350Hypothetical protein. (435 aa)
Ava_3351Glycosyl transferase, family 2. (434 aa)
Ava_33523-beta hydroxysteroid dehydrogenase/isomerase. (355 aa)
Ava_3353NAD-dependent epimerase/dehydratase. (360 aa)
Ava_3354dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (181 aa)
Ava_3355dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (296 aa)
Ava_3356Glucose-1-phosphate thymidylyltransferase, short form. (358 aa)
Ava_3357Glycosyl transferase, family 2. (342 aa)
Ava_3358Glycosyl transferase, family 2. (294 aa)
Ava_3359Hypothetical protein. (239 aa)
Ava_3360Glycosyl transferase, group 1. (355 aa)
cugPNucleotidyl transferase; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate. (389 aa)
gmd-2Short-chain dehydrogenase/reductase SDR; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (334 aa)
Ava_3653dTDP-4-dehydrorhamnose reductase. (294 aa)
Ava_3668Transferase hexapeptide repeat protein. (186 aa)
Ava_45883-beta hydroxysteroid dehydrogenase/isomerase. (311 aa)
Ava_4589UDP-glucose/GDP-mannose dehydrogenase. (462 aa)
Ava_4832Sugar transferase. (473 aa)
Ava_4844Glycosyl transferase WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family. (261 aa)
Ava_4846Lipopolysaccharide biosynthesis. (742 aa)
Ava_4927UDP-glucose pyrophosphorylase. (293 aa)
Your Current Organism:
Trichormus variabilis
NCBI taxonomy Id: 240292
Other names: Anabaena flos-aquae A-37, Anabaena flos-aquae UTCC 67, Anabaena sp. CCALA 007, Anabaena sp. PCC 7937, Anabaena variabilis ATCC 29413, Anabaena variabilis IAM M-204, Anabaena variabilis NIES-2095, Anabaena variabilis UTCC 105, Nostoc sp. PCC 7937, T. variabilis ATCC 29413, Trichormus variabilis ATCC 29413
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