STRINGSTRING
Ava_1405 Ava_1405 Ava_0144 Ava_0144 Ava_0450 Ava_0450 Ava_0463 Ava_0463 Ava_0651 Ava_0651 Ava_0670 Ava_0670 Ava_0972 Ava_0972 Ava_1097 Ava_1097 Ava_1113 Ava_1113 Ava_1134 Ava_1134 Ava_1188 Ava_1188 Ava_1292 Ava_1292 Ava_1433 Ava_1433 Ava_1579 Ava_1579 Ava_1692 Ava_1692 Ava_2491 Ava_2491 Ava_3066 Ava_3066 Ava_3187 Ava_3187 ntcA ntcA Ava_3340 Ava_3340 Ava_3354 Ava_3354 Ava_3366 Ava_3366 Ava_3536 Ava_3536 Ava_3692 Ava_3692 Ava_3781 Ava_3781 mtnD mtnD Ava_4383 Ava_4383 Ava_4422 Ava_4422 Ava_4501 Ava_4501 Ava_4550 Ava_4550 Ava_4552 Ava_4552 Ava_4979 Ava_4979
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ava_1405Mannose-6-phosphate isomerase, type 2. (135 aa)
Ava_0144Cyclic nucleotide-binding domain (cNMP-BD) protein. (227 aa)
Ava_0450Cupin region. (203 aa)
Ava_0463Possible Transcriptional Regulator, Crp/Fnr family. (197 aa)
Ava_0651Protein of unknown function DUF861. (90 aa)
Ava_0670Hypothetical protein. (156 aa)
Ava_0972Cyclic nucleotide-binding domain (cNMP-BD) protein. (122 aa)
Ava_1097Bacteriocin-processing peptidase, Cysteine peptidase, MEROPS family C39. (1042 aa)
Ava_1113dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (189 aa)
Ava_1134Cyclic nucleotide-binding domain (cNMP-BD) protein. (364 aa)
Ava_1188Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters. (1003 aa)
Ava_1292Mannose-6-phosphate isomerase, type 2. (140 aa)
Ava_1433Cyclic nucleotide-binding domain (cNMP-BD) protein. (408 aa)
Ava_1579TonB box-like protein. (151 aa)
Ava_1692Cyclic nucleotide-binding protein. (196 aa)
Ava_2491Possible Transcriptional Regulator, Crp/Fnr family. (393 aa)
Ava_3066Transcriptional regulator, Crp/Fnr family. (232 aa)
Ava_3187Transcriptional regulator, Crp/Fnr family. (231 aa)
ntcATranscriptional regulator, Crp/Fnr family; Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control. (223 aa)
Ava_3340Transcriptional regulator, Crp/Fnr family. (207 aa)
Ava_3354dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (181 aa)
Ava_3366Possible Transcriptional Regulator, Crp/Fnr family. (208 aa)
Ava_3536Cyclic nucleotide-binding domain (cNMP-BD) protein. (841 aa)
Ava_3692Cyclic nucleotide-binding domain (cNMP-BD) protein. (146 aa)
Ava_3781Pirin-like protein; Belongs to the pirin family. (294 aa)
mtnDAcireductone dioxygenase apoprotein; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. (182 aa)
Ava_4383Bacteriocin-processing peptidase, Cysteine peptidase, MEROPS family C39. (1011 aa)
Ava_4422Pirin-like protein; Belongs to the pirin family. (238 aa)
Ava_4501Protein of unknown function DUF861. (112 aa)
Ava_4550Cyclic nucleotide-binding domain (cNMP-BD) protein. (238 aa)
Ava_4552Cupin region. (124 aa)
Ava_4979Cupin region. (155 aa)
Your Current Organism:
Trichormus variabilis
NCBI taxonomy Id: 240292
Other names: Anabaena flos-aquae A-37, Anabaena flos-aquae UTCC 67, Anabaena sp. CCALA 007, Anabaena sp. PCC 7937, Anabaena variabilis ATCC 29413, Anabaena variabilis IAM M-204, Anabaena variabilis NIES-2095, Anabaena variabilis UTCC 105, Nostoc sp. PCC 7937, T. variabilis ATCC 29413, Trichormus variabilis ATCC 29413
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