Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMX00680.1 | AMX00891.1 | ATY39_15405 | ATY39_16800 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.806 |
| AMX00680.1 | AMX00914.1 | ATY39_15405 | ATY39_16915 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.839 |
| AMX00680.1 | sigG | ATY39_15405 | ATY39_02235 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.802 |
| AMX00680.1 | spoIVA | ATY39_15405 | ATY39_03755 | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage IV sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.795 |
| AMX00891.1 | AMX00680.1 | ATY39_16800 | ATY39_15405 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.806 |
| AMX00891.1 | AMX00914.1 | ATY39_16800 | ATY39_16915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.817 |
| AMX00891.1 | sigG | ATY39_16800 | ATY39_02235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.801 |
| AMX00891.1 | spoIVA | ATY39_16800 | ATY39_03755 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Stage IV sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.806 |
| AMX00914.1 | AMX00680.1 | ATY39_16915 | ATY39_15405 | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.839 |
| AMX00914.1 | AMX00891.1 | ATY39_16915 | ATY39_16800 | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.817 |
| AMX00914.1 | sigG | ATY39_16915 | ATY39_02235 | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.811 |
| AMX00914.1 | spoIVA | ATY39_16915 | ATY39_03755 | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage IV sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.842 |
| sigG | AMX00680.1 | ATY39_02235 | ATY39_15405 | RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.802 |
| sigG | AMX00891.1 | ATY39_02235 | ATY39_16800 | RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.801 |
| sigG | AMX00914.1 | ATY39_02235 | ATY39_16915 | RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.811 |
| sigG | spoIVA | ATY39_02235 | ATY39_03755 | RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage IV sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.813 |
| spoIVA | AMX00680.1 | ATY39_03755 | ATY39_15405 | Stage IV sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.795 |
| spoIVA | AMX00891.1 | ATY39_03755 | ATY39_16800 | Stage IV sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.806 |
| spoIVA | AMX00914.1 | ATY39_03755 | ATY39_16915 | Stage IV sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.842 |
| spoIVA | sigG | ATY39_03755 | ATY39_02235 | Stage IV sporulation protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.813 |