(18 nodes) RNA polymerase II, core complex, and RNA polymerase II complex binding network (Pyricularia oryzae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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protein homology

Your Input:
	MGG_06943	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (122 aa)
	MGG_16287	Uncharacterized protein. (414 aa)
	MGG_04714	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1276 aa)
	MGG_02463	RNA_pol_L_2 domain-containing protein. (130 aa)
	MGG_04508	RPOL4c domain-containing protein. (150 aa)
	MGG_15720	CDC73_C domain-containing protein. (421 aa)
	MGG_04652	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1757 aa)
	MGG_14751	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (556 aa)
	MGG_07316	FACT complex subunit spt-16. (1034 aa)
	MGG_12268	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1026 aa)
	MGG_07391	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (131 aa)
	MGG_06462	Tetratricopeptide repeat protein 1. (1221 aa)
	MGG_13511	Transcription elongation factor S-II. (304 aa)
	MGG_06274	Uncharacterized protein. (495 aa)
	MGG_03215	DNA-directed RNA polymerase II subunit RPB3. (330 aa)
	MGG_17442	Uncharacterized protein. (172 aa)
	MGG_00958	Plus3 domain-containing protein. (591 aa)
	MGG_11667	Uncharacterized protein. (76 aa)

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MGG_00958	MGG_02463	G4ND66	G4MRX6	Plus3 domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.825
MGG_00958	MGG_03215	G4ND66	G4N9Z3	Plus3 domain-containing protein.	DNA-directed RNA polymerase II subunit RPB3.	0.935
MGG_00958	MGG_04508	G4ND66	G4MS77	Plus3 domain-containing protein.	RPOL4c domain-containing protein.	0.875
MGG_00958	MGG_04652	G4ND66	G4MT89	Plus3 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.961
MGG_00958	MGG_04714	G4ND66	G4MR84	Plus3 domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.921
MGG_00958	MGG_06274	G4ND66	G4N8E9	Plus3 domain-containing protein.	Uncharacterized protein.	0.997
MGG_00958	MGG_06462	G4ND66	G4N775	Plus3 domain-containing protein.	Tetratricopeptide repeat protein 1.	0.999
MGG_00958	MGG_06943	G4ND66	G4MNF7	Plus3 domain-containing protein.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.942
MGG_00958	MGG_07316	G4ND66	G4MV07	Plus3 domain-containing protein.	FACT complex subunit spt-16.	0.970
MGG_00958	MGG_07391	G4ND66	G4N0C4	Plus3 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.871
MGG_00958	MGG_11667	G4ND66	G4NEH8	Plus3 domain-containing protein.	Uncharacterized protein.	0.859
MGG_00958	MGG_12268	G4ND66	G4MXS4	Plus3 domain-containing protein.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.985
MGG_00958	MGG_13511	G4ND66	G4N7B6	Plus3 domain-containing protein.	Transcription elongation factor S-II.	0.850
MGG_00958	MGG_14751	G4ND66	G4MU89	Plus3 domain-containing protein.	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]	0.994
MGG_00958	MGG_15720	G4ND66	G4MT03	Plus3 domain-containing protein.	CDC73_C domain-containing protein.	0.997
MGG_00958	MGG_16287	G4ND66	G4MR31	Plus3 domain-containing protein.	Uncharacterized protein.	0.997
MGG_00958	MGG_17442	G4ND66	G4NBQ8	Plus3 domain-containing protein.	Uncharacterized protein.	0.846
MGG_02463	MGG_00958	G4MRX6	G4ND66	RNA_pol_L_2 domain-containing protein.	Plus3 domain-containing protein.	0.825
MGG_02463	MGG_03215	G4MRX6	G4N9Z3	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase II subunit RPB3.	0.999
MGG_02463	MGG_04508	G4MRX6	G4MS77	RNA_pol_L_2 domain-containing protein.	RPOL4c domain-containing protein.	0.999