(8 nodes) RNA polymerase II, core complex network (Pyricularia oryzae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MGG_04714	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1276 aa)
	MGG_02463	RNA_pol_L_2 domain-containing protein. (130 aa)
	MGG_04508	RPOL4c domain-containing protein. (150 aa)
	MGG_04652	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1757 aa)
	MGG_07391	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (131 aa)
	MGG_03215	DNA-directed RNA polymerase II subunit RPB3. (330 aa)
	MGG_17442	Uncharacterized protein. (172 aa)
	MGG_11667	Uncharacterized protein. (76 aa)

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MGG_02463	MGG_03215	G4MRX6	G4N9Z3	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase II subunit RPB3.	0.999
MGG_02463	MGG_04508	G4MRX6	G4MS77	RNA_pol_L_2 domain-containing protein.	RPOL4c domain-containing protein.	0.999
MGG_02463	MGG_04652	G4MRX6	G4MT89	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
MGG_02463	MGG_04714	G4MRX6	G4MR84	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
MGG_02463	MGG_07391	G4MRX6	G4N0C4	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
MGG_02463	MGG_11667	G4MRX6	G4NEH8	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999
MGG_02463	MGG_17442	G4MRX6	G4NBQ8	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.999
MGG_03215	MGG_02463	G4N9Z3	G4MRX6	DNA-directed RNA polymerase II subunit RPB3.	RNA_pol_L_2 domain-containing protein.	0.999
MGG_03215	MGG_04508	G4N9Z3	G4MS77	DNA-directed RNA polymerase II subunit RPB3.	RPOL4c domain-containing protein.	0.999
MGG_03215	MGG_04652	G4N9Z3	G4MT89	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
MGG_03215	MGG_04714	G4N9Z3	G4MR84	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
MGG_03215	MGG_07391	G4N9Z3	G4N0C4	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
MGG_03215	MGG_11667	G4N9Z3	G4NEH8	DNA-directed RNA polymerase II subunit RPB3.	Uncharacterized protein.	0.999
MGG_03215	MGG_17442	G4N9Z3	G4NBQ8	DNA-directed RNA polymerase II subunit RPB3.	Uncharacterized protein.	0.999
MGG_04508	MGG_02463	G4MS77	G4MRX6	RPOL4c domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
MGG_04508	MGG_03215	G4MS77	G4N9Z3	RPOL4c domain-containing protein.	DNA-directed RNA polymerase II subunit RPB3.	0.999
MGG_04508	MGG_04652	G4MS77	G4MT89	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
MGG_04508	MGG_04714	G4MS77	G4MR84	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
MGG_04508	MGG_07391	G4MS77	G4N0C4	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
MGG_04508	MGG_11667	G4MS77	G4NEH8	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999