10 items (Pyricularia oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MGG_06676	Uncharacterized protein. (191 aa)
	MGG_05468	Helo_like_N domain-containing protein. (586 aa)
	MGG_02187	Uncharacterized protein. (802 aa)
	MGG_11774	Endoglucanase. (427 aa)
	MGG_04749	Uncharacterized protein. (406 aa)
	MGG_02457	GTP-binding protein rho2. (200 aa)
	MGG_04517	Uncharacterized protein. (889 aa)
	MGG_10468	Uncharacterized protein. (497 aa)
	MGG_02745	Uncharacterized protein. (162 aa)
	MGG_10323	GTP-binding protein RHO3. (210 aa)

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MGG_02187	MGG_02457	G4MP84	G4MRX0	Uncharacterized protein.	GTP-binding protein rho2.	0.794
MGG_02187	MGG_02745	G4MP84	G4NJ49	Uncharacterized protein.	Uncharacterized protein.	0.636
MGG_02187	MGG_04517	G4MP84	G4MSE6	Uncharacterized protein.	Uncharacterized protein.	0.648
MGG_02187	MGG_05468	G4MP84	G4MLU4	Uncharacterized protein.	Helo_like_N domain-containing protein.	0.794
MGG_02187	MGG_06676	G4MP84	G4MKT0	Uncharacterized protein.	Uncharacterized protein.	0.794
MGG_02187	MGG_10323	G4MP84	G4NJY7	Uncharacterized protein.	GTP-binding protein RHO3.	0.794
MGG_02457	MGG_02187	G4MRX0	G4MP84	GTP-binding protein rho2.	Uncharacterized protein.	0.794
MGG_02457	MGG_02745	G4MRX0	G4NJ49	GTP-binding protein rho2.	Uncharacterized protein.	0.655
MGG_02457	MGG_04749	G4MRX0	G4MQV0	GTP-binding protein rho2.	Uncharacterized protein.	0.794
MGG_02457	MGG_10468	G4MRX0	G4MYE4	GTP-binding protein rho2.	Uncharacterized protein.	0.794
MGG_02457	MGG_11774	G4MRX0	G4MPB3	GTP-binding protein rho2.	Endoglucanase.	0.794
MGG_02745	MGG_02187	G4NJ49	G4MP84	Uncharacterized protein.	Uncharacterized protein.	0.636
MGG_02745	MGG_02457	G4NJ49	G4MRX0	Uncharacterized protein.	GTP-binding protein rho2.	0.655
MGG_02745	MGG_04517	G4NJ49	G4MSE6	Uncharacterized protein.	Uncharacterized protein.	0.414
MGG_02745	MGG_04749	G4NJ49	G4MQV0	Uncharacterized protein.	Uncharacterized protein.	0.636
MGG_02745	MGG_05468	G4NJ49	G4MLU4	Uncharacterized protein.	Helo_like_N domain-containing protein.	0.655
MGG_02745	MGG_06676	G4NJ49	G4MKT0	Uncharacterized protein.	Uncharacterized protein.	0.655
MGG_02745	MGG_10323	G4NJ49	G4NJY7	Uncharacterized protein.	GTP-binding protein RHO3.	0.655
MGG_02745	MGG_10468	G4NJ49	G4MYE4	Uncharacterized protein.	Uncharacterized protein.	0.636
MGG_02745	MGG_11774	G4NJ49	G4MPB3	Uncharacterized protein.	Endoglucanase.	0.636