(50 nodes) rRNA binding network (Pyricularia oryzae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MGG_04310	54S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family. (284 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (777 aa)
	MGG_04467	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (313 aa)
	MGG_06658	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (214 aa)
	MGG_06710	Uncharacterized protein. (212 aa)
	MGG_05551	Uncharacterized protein. (495 aa)
	MGG_16204	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	MGG_05661	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (156 aa)
	MGG_07006	Uncharacterized protein. (317 aa)
	MGG_01520	S4 RNA-binding domain-containing protein. (460 aa)
	MGG_01561	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (613 aa)
	MGG_14748	Uncharacterized protein. (313 aa)
	MGG_04829	60S ribosomal protein L9-A. (194 aa)
	MGG_01624	Fungal specific transcription factor domain-containing protein. (1023 aa)
	MGG_10185	60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. (157 aa)
	MGG_08828	Uncharacterized protein. (317 aa)
	MGG_08908	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (251 aa)
	MGG_01217	Multiple RNA-binding domain-containing protein 1. (867 aa)
	MGG_10382	Ribosome biogenesis protein RPF2. (326 aa)
	MGG_14729	Mitochondrial ribosomal protein subunit S18. (237 aa)
	MGG_07048	60S ribosomal protein L5. (302 aa)
	MGG_07392	50S ribosomal protein L14; Belongs to the universal ribosomal protein uL14 family. (131 aa)
	MGG_07753	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (173 aa)
	MGG_09556	Mitochondrial 37S ribosomal protein S17. (169 aa)
	MGG_09508	Ribosomal_S7 domain-containing protein. (309 aa)
	MGG_04921	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (139 aa)
	MGG_06071	50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (157 aa)
	MGG_05238	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (150 aa)
	MGG_05260	Uncharacterized protein. (1781 aa)
	MGG_03120	30S ribosomal protein S6. (128 aa)
	MGG_03680	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
	MGG_03679	Uncharacterized protein. (325 aa)
	MGG_03587	Essential for mitotic growth 1. (264 aa)
	MGG_06322	Brix domain-containing protein. (452 aa)
	MGG_06269	60S ribosomal protein L2. (254 aa)
	MGG_03203	54S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (251 aa)
	MGG_01078	Ribosome biogenesis protein BRX1. (313 aa)
	MGG_01077	F-box domain-containing protein. (424 aa)
	MGG_00349	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	MGG_00977	U3 small nucleolar ribonucleoprotein IMP4. (295 aa)
	MGG_00087	Ribosome biogenesis protein SSF1. (474 aa)
	MGG_00764	Uncharacterized protein. (328 aa)
	MGG_04201	U3 small nucleolar ribonucleoprotein imp3. (183 aa)
	MGG_04200	Uncharacterized protein. (220 aa)
	MGG_04142	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (442 aa)
	MGG_02620	Ribosomal protein L37; Binds to the 23S rRNA. (94 aa)
	MGG_02952	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (191 aa)
	MGG_02951	Uncharacterized protein. (398 aa)
	MGG_02950	Uncharacterized protein. (310 aa)
	MGCH7_ch7g494	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	MGG_00087	A4R0Q1	G4NEI7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein SSF1.	0.982
ERB1	MGG_00764	A4R0Q1	G4NEL8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.437
ERB1	MGG_00977	A4R0Q1	G4ND46	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar ribonucleoprotein IMP4.	0.803
ERB1	MGG_01077	A4R0Q1	G4NCI0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	F-box domain-containing protein.	0.948
ERB1	MGG_01078	A4R0Q1	G4NCH9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein BRX1.	0.965
ERB1	MGG_01217	A4R0Q1	G4MX17	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Multiple RNA-binding domain-containing protein 1.	0.889
ERB1	MGG_01561	A4R0Q1	G4MTH8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.988
ERB1	MGG_02620	A4R0Q1	G4NJL5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal protein L37; Binds to the 23S rRNA.	0.717
ERB1	MGG_02950	A4R0Q1	G4NLD0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.611
ERB1	MGG_02951	A4R0Q1	G4NLC9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.717
ERB1	MGG_03587	A4R0Q1	G4N7E4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Essential for mitotic growth 1.	0.611
ERB1	MGG_04142	A4R0Q1	G4NIR7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.722
ERB1	MGG_04201	A4R0Q1	G4NF51	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar ribonucleoprotein imp3.	0.643
ERB1	MGG_04310	A4R0Q1	G4NGH6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	54S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.	0.681
ERB1	MGG_04467	A4R0Q1	G4MKJ9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.931
ERB1	MGG_04829	A4R0Q1	G4MU70	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L9-A.	0.809
ERB1	MGG_04921	A4R0Q1	G4N349	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.835
ERB1	MGG_05260	A4R0Q1	G4N5F3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.919
ERB1	MGG_06269	A4R0Q1	G4N8F6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L2.	0.499
ERB1	MGG_06322	A4R0Q1	G4N843	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Brix domain-containing protein.	0.968