11 items (Pyricularia oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	INO80	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair. (1944 aa)
	MGG_08312	Uncharacterized protein. (792 aa)
	MGG_03958	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (459 aa)
	MGG_00754	Uncharacterized protein. (291 aa)
	MGG_00136	HMG box domain-containing protein. (286 aa)
	MGG_01082	PAPA-1 domain-containing protein. (424 aa)
	MGG_03173	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (470 aa)
	MGG_16762	Uncharacterized protein; Belongs to the actin family. (771 aa)
	MGG_06129	YL1_C domain-containing protein. (195 aa)
	MGG_05229	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (753 aa)
	MGG_11256	Actl6a protein; Belongs to the actin family. (509 aa)

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
INO80	MGG_00136	A4R227	G4NE82	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	HMG box domain-containing protein.	0.965
INO80	MGG_01082	A4R227	G4NCH4	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	PAPA-1 domain-containing protein.	0.432
INO80	MGG_03173	A4R227	G4NAF3	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.965
INO80	MGG_03958	A4R227	G4NH29	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.980
INO80	MGG_05229	A4R227	G4N5B7	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.983
INO80	MGG_06129	A4R227	G4N5J7	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	YL1_C domain-containing protein.	0.896
INO80	MGG_08312	A4R227	G4MWV4	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	Uncharacterized protein.	0.886
INO80	MGG_11256	A4R227	G4MXK8	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	Actl6a protein; Belongs to the actin family.	0.979
INO80	MGG_16762	A4R227	G4N5J9	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	Uncharacterized protein; Belongs to the actin family.	0.964
MGG_00136	INO80	G4NE82	A4R227	HMG box domain-containing protein.	Chromatin-remodeling ATPase INO80; ATPase component of the INO80 complex which remodels chromatin by shifting nucleosomes and is involved in DNA repair.	0.965
MGG_00136	MGG_03173	G4NE82	G4NAF3	HMG box domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.833
MGG_00136	MGG_03958	G4NE82	G4NH29	HMG box domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.890
MGG_00136	MGG_05229	G4NE82	G4N5B7	HMG box domain-containing protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.884
MGG_00136	MGG_06129	G4NE82	G4N5J7	HMG box domain-containing protein.	YL1_C domain-containing protein.	0.751
MGG_00136	MGG_08312	G4NE82	G4MWV4	HMG box domain-containing protein.	Uncharacterized protein.	0.877
MGG_00136	MGG_11256	G4NE82	G4MXK8	HMG box domain-containing protein.	Actl6a protein; Belongs to the actin family.	0.885
MGG_00136	MGG_16762	G4NE82	G4N5J9	HMG box domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.788
MGG_00754	MGG_01082	G4NEN2	G4NCH4	Uncharacterized protein.	PAPA-1 domain-containing protein.	0.578
MGG_00754	MGG_03173	G4NEN2	G4NAF3	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.468
MGG_00754	MGG_03958	G4NEN2	G4NH29	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.430