16 items (Pyricularia oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MGG_07255	E3 ubiquitin-protein ligase. (816 aa)
	MGG_05477	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (459 aa)
	MGG_01380	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (430 aa)
	MGG_01236	WD repeat-containing protein slp1. (593 aa)
	MGG_12477	Uncharacterized protein. (558 aa)
	MGG_01581	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (439 aa)
	INT6	Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (446 aa)
	MGG_00730	RBR-type E3 ubiquitin transferase. (743 aa)
	MGG_00859	RBR-type E3 ubiquitin transferase. (522 aa)
	MGG_00908	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family. (421 aa)
	MGG_00330	26S protease subunit rpt4; Belongs to the AAA ATPase family. (391 aa)
	MGG_03294	RBR-type E3 ubiquitin transferase. (783 aa)
	MGG_06519	WD domain-containing protein. (830 aa)
	MGG_12925	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (464 aa)
	MGG_04743	PKHD-type hydroxylase TPA1. (667 aa)
	MGG_06892	WD repeat-containing protein srw1. (604 aa)

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MGG_00330	MGG_00908	G4NCY2	G4NDN0	26S protease subunit rpt4; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.999
MGG_00330	MGG_01236	G4NCY2	G4MXK2	26S protease subunit rpt4; Belongs to the AAA ATPase family.	WD repeat-containing protein slp1.	0.491
MGG_00330	MGG_01380	G4NCY2	G4MZ45	26S protease subunit rpt4; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
MGG_00330	MGG_01581	G4NCY2	G4MTV8	26S protease subunit rpt4; Belongs to the AAA ATPase family.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
MGG_00330	MGG_05477	G4NCY2	G4MLV2	26S protease subunit rpt4; Belongs to the AAA ATPase family.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.999
MGG_00330	MGG_06519	G4NCY2	G4N6V1	26S protease subunit rpt4; Belongs to the AAA ATPase family.	WD domain-containing protein.	0.491
MGG_00330	MGG_06892	G4NCY2	G4MMY6	26S protease subunit rpt4; Belongs to the AAA ATPase family.	WD repeat-containing protein srw1.	0.491
MGG_00330	MGG_12925	G4NCY2	G4N4U1	26S protease subunit rpt4; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.999
MGG_00730	MGG_00859	G4NEW2	G4NDZ4	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.539
MGG_00859	MGG_00730	G4NDZ4	G4NEW2	RBR-type E3 ubiquitin transferase.	RBR-type E3 ubiquitin transferase.	0.539
MGG_00908	MGG_00330	G4NDN0	G4NCY2	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease subunit rpt4; Belongs to the AAA ATPase family.	0.999
MGG_00908	MGG_01236	G4NDN0	G4MXK2	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	WD repeat-containing protein slp1.	0.419
MGG_00908	MGG_01380	G4NDN0	G4MZ45	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
MGG_00908	MGG_01581	G4NDN0	G4MTV8	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
MGG_00908	MGG_05477	G4NDN0	G4MLV2	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.999
MGG_00908	MGG_06519	G4NDN0	G4N6V1	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	WD domain-containing protein.	0.419
MGG_00908	MGG_06892	G4NDN0	G4MMY6	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	WD repeat-containing protein srw1.	0.419
MGG_00908	MGG_12925	G4NDN0	G4N4U1	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.999
MGG_01236	MGG_00330	G4MXK2	G4NCY2	WD repeat-containing protein slp1.	26S protease subunit rpt4; Belongs to the AAA ATPase family.	0.491
MGG_01236	MGG_00908	G4MXK2	G4NDN0	WD repeat-containing protein slp1.	26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.	0.419