15 items (Pyricularia oryzae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MGG_01592	Eukaryotic translation initiation factor 2 subunit gamma. (513 aa)
	GUF1	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (701 aa)
	MGG_02504	Elongation factor Tu GTP binding domain-containing protein. (563 aa)
	MEF1	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (800 aa)
	MGG_01742	Elongation factor 2. (844 aa)
	MGG_08162	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (443 aa)
	MGG_01433	Elongation factor G. (873 aa)
	MGG_16854	Tr-type G domain-containing protein. (657 aa)
	MGG_06066	Eukaryotic translation initiation factor 5B. (1062 aa)
	MGG_05265	Elongation factor 2. (1073 aa)
	MGG_03641	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (473 aa)
	MGG_13500	U5 small nuclear ribonucleoprotein component. (989 aa)
	MGG_00521	Tr-type G domain-containing protein. (873 aa)
	MGG_00449	Eukaryotic peptide chain release factor GTP-binding subunit. (731 aa)
	MGG_11482	Translation initiation factor IF-2. (1154 aa)

Your Current Organism:

Pyricularia oryzae

NCBI taxonomy Id: 242507
Other names: Magnaporthe grisea 70-15, P. oryzae 70-15, Pyricularia oryzae 70-15

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GUF1	MGG_01592	A4QV78	G4MTX0	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Eukaryotic translation initiation factor 2 subunit gamma.	0.417
GUF1	MGG_08162	A4QV78	G4MYU6	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.494
GUF1	MGG_11482	A4QV78	G4NDZ9	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Translation initiation factor IF-2.	0.547
MEF1	MGG_03641	G4MTI3	G4N716	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.682
MEF1	MGG_06066	G4MTI3	G4N555	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Eukaryotic translation initiation factor 5B.	0.613
MEF1	MGG_08162	G4MTI3	G4MYU6	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.865
MEF1	MGG_11482	G4MTI3	G4NDZ9	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Translation initiation factor IF-2.	0.678
MGG_00449	MGG_01592	G4NC31	G4MTX0	Eukaryotic peptide chain release factor GTP-binding subunit.	Eukaryotic translation initiation factor 2 subunit gamma.	0.663
MGG_00449	MGG_01742	G4NC31	G4MVB0	Eukaryotic peptide chain release factor GTP-binding subunit.	Elongation factor 2.	0.658
MGG_00449	MGG_06066	G4NC31	G4N555	Eukaryotic peptide chain release factor GTP-binding subunit.	Eukaryotic translation initiation factor 5B.	0.701
MGG_00449	MGG_11482	G4NC31	G4NDZ9	Eukaryotic peptide chain release factor GTP-binding subunit.	Translation initiation factor IF-2.	0.440
MGG_01433	MGG_03641	G4MZL6	G4N716	Elongation factor G.	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.682
MGG_01433	MGG_06066	G4MZL6	G4N555	Elongation factor G.	Eukaryotic translation initiation factor 5B.	0.613
MGG_01433	MGG_08162	G4MZL6	G4MYU6	Elongation factor G.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.866
MGG_01433	MGG_11482	G4MZL6	G4NDZ9	Elongation factor G.	Translation initiation factor IF-2.	0.713
MGG_01592	GUF1	G4MTX0	A4QV78	Eukaryotic translation initiation factor 2 subunit gamma.	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	0.417
MGG_01592	MGG_00449	G4MTX0	G4NC31	Eukaryotic translation initiation factor 2 subunit gamma.	Eukaryotic peptide chain release factor GTP-binding subunit.	0.663
MGG_01592	MGG_01742	G4MTX0	G4MVB0	Eukaryotic translation initiation factor 2 subunit gamma.	Elongation factor 2.	0.607
MGG_01592	MGG_03641	G4MTX0	G4N716	Eukaryotic translation initiation factor 2 subunit gamma.	Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.637
MGG_01592	MGG_06066	G4MTX0	G4N555	Eukaryotic translation initiation factor 2 subunit gamma.	Eukaryotic translation initiation factor 5B.	0.909