STRINGSTRING
PG_0449 PG_0449 PG_0631 PG_0631 PG_0632 PG_0632 PG_0633 PG_0633 PG_0634 PG_0634 PG_0707 PG_0707 PG_0779 PG_0779 PG_0780 PG_0780 PG_0781 PG_0781 PG_0782 PG_0782 PG_0783 PG_0783 PG_0785 PG_0785 PG_0786 PG_0786 PG_0787 PG_0787 PG_2008 PG_2008 PG_2066 PG_2066 PG_2185 PG_2185 PG_2186 PG_2186
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PG_0449TPR domain protein. (460 aa)
PG_0631MotA/TolQ/ExbB proton channel family protein. (204 aa)
PG_0632Biopolymer transport protein ExbD, putative; Identified by match to PFAM protein family HMM PF02472. (139 aa)
PG_0633Hypothetical protein; Identified by Glimmer2; putative. (275 aa)
PG_0634ThiJ/PfpI family protein. (181 aa)
PG_0707TonB-dependent receptor, putative. (848 aa)
PG_0779Hypothetical protein; Identified by Glimmer2; putative. (157 aa)
PG_0780Hypothetical protein; Identified by Glimmer2; putative. (204 aa)
PG_0781Hypothetical protein; Identified by Glimmer2; putative. (156 aa)
PG_0782MotA/TolQ/ExbB proton channel family protein. (270 aa)
PG_0783Hydrolase, putative. (275 aa)
PG_0785tonB protein, putative. (230 aa)
PG_0786Hypothetical protein; Identified by Glimmer2; putative. (40 aa)
PG_0787Hypothetical protein; Identified by Glimmer2; putative. (80 aa)
PG_2008TonB-dependent receptor, putative. (833 aa)
PG_2066Lipoprotein, putative. (351 aa)
PG_2185Transporter, putative; Similar to GB:D13633, and PID:286013; identified by sequence similarity; putative. (438 aa)
PG_2186Transcriptional regulator, putative; Identified by match to PFAM protein family HMM PF03965. (111 aa)
Your Current Organism:
Porphyromonas gingivalis
NCBI taxonomy Id: 242619
Other names: P. gingivalis W83, Porphyromonas gingivalis W83, Porphyromonas gingivalis str. W83, Porphyromonas gingivalis strain W83
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