STRINGSTRING
RB12449 RB12449 RB12450 RB12450 RB12451 RB12451 RB12452 RB12452 RB12455 RB12455 RB12456 RB12456 RB12458 RB12458
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RB12449Hypothetical protein-signal peptide and transmembrane prediction. (103 aa)
RB12450Hypothetical protein-signal peptide and transmembrane prediction. (154 aa)
RB12451Hypothetical protein-transmembrane prediction. (305 aa)
RB12452Hypothetical protein. (153 aa)
RB12455Hypothetical protein. (164 aa)
RB12456Similar to cyclophilin; PMID: 8132648 best DB hits: BLAST: pir:B53522; 20k cyclophilin - Toxoplasma gondii (fragment) -----; E=0.056. (132 aa)
RB12458Hypothetical protein. (85 aa)
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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