STRINGSTRING
RB1743 RB1743 RB1746 RB1746 RB1748 RB1748 RB1749 RB1749 RB1750 RB1750
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RB1743Probable transcription regulator; Best DB hits: BLAST: pir:E82656; conserved hypothetical protein XF1630 [imported] -; E=5e-06 pir:T35300; probable transcription regulator - Streptomyces; E=3e-04 pir:D69900; conserved hypothetical protein yobV - Bacillus subtilis; E=0.003 COG: XF1630; COG2378 Predicted transcriptional regulator; E=5e-07. (341 aa)
RB1746Hypothetical protein. (283 aa)
RB1748Hypothetical protein. (65 aa)
RB1749Hypothetical protein. (69 aa)
RB1750Hypothetical protein-transmembrane prediction. (58 aa)
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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