STRINGSTRING
flhA flhA clpP clpP clpP-2 clpP-2 fliN fliN fliG fliG flgE flgE fliP fliP fliQ fliQ fliR fliR flhB flhB dnaK dnaK fliC fliC FliC FliC fliG-2 fliG-2 flgL flgL dnaK-2 dnaK-2 dnaK-3 dnaK-3 fliC-2 fliC-2 fliM fliM fliF fliF dnaK-4 dnaK-4 fliN-2 fliN-2 RB9276 RB9276
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
flhAFlagella-associated protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (687 aa)
clpPATP-dependent clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (227 aa)
clpP-2ATP-dependent clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (195 aa)
fliNPMID: 2651416 best DB hits: BLAST: swissprot:P35539; FLIN_ERWCA FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=2e-04 swissprot:P15070; FLIN_ECOLI FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-04 swissprot:P26419; FLIN_SALTY FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-04 COG: TM0680a; COG1886 Flagellar motor switch/type III secretory pathway; E=2e-06 PFAM: PF01052; Surface presentation of antigens (SP; E=2.3e-07. (144 aa)
fliGFlagellar motor switch protein FliG; PMID: 10440379 best DB hits: BLAST: swissprot:Q9WY63; FLIG_THEMA FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=7e-08 pir:G71328; probable flagellar motor switch protein (fliG-2) -; E=6e-07 gb:AAF35852.1; AF220006_1 (AF220006) lateral flagellar motor; E=2e-06 COG: TM0220; COG1536 Flagellar motor switch protein; E=7e-09. (435 aa)
flgEFlagellar hook protein FlgE; PMID: 10368149 best DB hits: BLAST: gb:AAD24206.1; AF049342_4 (AF049342) flagellar hook protein FlgE; E=8e-22 gb:AAA61738.1; (U19712) flagellar hook polypeptide [Borrelia; E=1e-21 gb:AAA91361.1; (U12870) flagellar distal rod protein [Borrelia; E=3e-21 COG: BB0283; COG1749 Flagellar basal body and hook proteins; E=5e-22 PFAM: PF00460; Flagella basal body rod protein; E=3.7e-10. (811 aa)
fliPFlagellar biosynthetic protein fliP-putative tr FT ansporter of flagellar proteins; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (336 aa)
fliQProbable flagellar biosynthetic protein fliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (88 aa)
fliRPMID: 9683497 best DB hits: BLAST: gb:AAC32324.1; (AF044580) flagellar protein FliR [Rhodobacter; E=1e-14 pir:B83465; flagellar biosynthetic protein FliR PA1448 [imported] -; E=2e-13 pir:E81323; flagellar biosynthetic protein Cj1179c [imported] -; E=4e-12 COG: PA1448; COG1684 Flagellar biosynthesis/type III secretory pathway; E=2e-14 PFAM: PF01311; Bacterial export proteins, fami; E=7.9e-32. (264 aa)
flhBPMID: 8299954 best DB hits: BLAST: pir:I40395; flagellar biosynthetic protein FlhB - Bacillus subtilis; E=7e-51 swissprot:P35538; FLHB_BACSU FLAGELLAR BIOSYNTHETIC PROTEIN FLHB; E=7e-51 pir:D72319; flagellar biosynthetic protein flhB TM0909 - Thermotoga; E=6e-46 COG: BS_flhB; COG1377 Flagellar biosynthesis/type III secretory pathway; E=6e-52 TM1672; COG2257 Uncharacterized BCR homologous to the cytoplasmic; E=9e-10 PFAM: PF01312; FlhB HrpN YscU SpaS Family; E=1.4e-91. (360 aa)
dnaKChaperone protein HscC; PMID: 9735342 best DB hits: BLAST: swissprot:P77319; HSCC_ECOLI CHAPERONE PROTEIN HSCC (HSC62); E=1e-92 gb:AAG54984.1; AE005244_2 (AE005244) putative dnaK protein; E=3e-91 embl:CAA06391.1; (AJ005129) dnaK [Thermotoga maritima]; E=3e-88 COG: ybeW; COG0443 Molecular chaperone; E=1e-93 PFAM: PF01869; BadF/BadG/BcrA/BcrD ATPase fa; E=0.37 PF00012; Hsp70 protein; E=9.1e-147. (587 aa)
fliCFlagellin E; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (718 aa)
FliCFlagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (739 aa)
fliG-2Flagellar motor switch protein fliG; PMID: 10440379 best DB hits: BLAST: swissprot:Q9WY63; FLIG_THEMA FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=3e-60 pir:G71328; probable flagellar motor switch protein (fliG-2) -; E=2e-57 swissprot:P23448; FLIG_BACSU FLAGELLAR MOTOR SWITCH PROTEIN FLIG; E=5e-57 COG: TM0220; COG1536 Flagellar motor switch protein; E=3e-61 PFAM: PF01706; FliG C-terminal domain; E=7.8e-45. (349 aa)
flgLProbable flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (651 aa)
dnaK-2Best DB hits: BLAST: pir:F82206; DnaK-related protein VC1374 [imported] - Vibrio cholerae; E=1e-110 pir:E82206; DnaK-related protein VC1373 [imported] - Vibrio cholerae; E=2e-75 pir:C72385; dnaK-type molecular chaperone dnaK - Thermotoga maritima; E=4e-07 COG: VC1374; COG0443 Molecular chaperone; E=1e-111 PFAM: PF00370; FGGY family of carbohydrate kinases,; E=0.8 PF00012; Hsp70 protein; E=5.8e-06. (645 aa)
dnaK-3Probable chaperone protein DnaK; PMID: 2345134 best DB hits: BLAST: pir:E82206; DnaK-related protein VC1373 [imported] - Vibrio cholerae; E=1e-142 pir:F82206; DnaK-related protein VC1374 [imported] - Vibrio cholerae; E=3e-88 swissprot:Q51382; HSCA_PSEAE CHAPERONE PROTEIN HSCA HOMOLOG; E=4e-08 COG: VC1373_1; COG0443 Molecular chaperone; E=1e-99 PFAM: PF00012; Hsp70 protein; E=0.0012. (988 aa)
fliC-2Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (685 aa)
fliMFlagellar motor switch protein fliM; PMID: 96345631 PMID: 8755894 best DB hits: BLAST: swissprot:P74927; FLIM_TREPA FLAGELLAR MOTOR SWITCH PROTEIN FLIM; E=7e-47 swissprot:Q57511; FLIM_BORBU FLAGELLAR MOTOR SWITCH PROTEIN FLIM; E=5e-46 ddbj:BAB06165.1; (AP001515) flagellar motor switch protein; E=3e-44 COG: TP0721; COG1868 Flagellar motor switch protein; E=7e-48 PFAM: PF02154; Flagellar motor switch protein FliM; E=1.3e-68 PF01052; Surface presentation of antigens (S; E=0.19. (428 aa)
fliFProbable polar flagellar M-ring protein FliF; PMID: 20115548 PMID: 10648530 best DB hits: BLAST: gb:AAD15920.1; (AF069392) polar flagellar M-ring protein FliF; E=6e-04 swissprot:Q53151; FLIF_RHOSH FLAGELLAR M-RING PROTEIN -----; E=0.001 swissprot:O67241; FLIF_AQUAE FLAGELLAR M-RING PROTEIN -----; E=0.002 COG: aq_1182; COG1766 Flagellar biosynthesis/type III secretory pathway; E=2e-04 PFAM: PF01514; Secretory protein of YscJ/FliF fa; E=0.00027. (545 aa)
dnaK-4DnaK protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. (704 aa)
fliN-2Flagellar motor switch protein fliN (fragment); PMID: 2656645 PMID: 2651416 best DB hits: BLAST: swissprot:P35539; FLIN_ERWCA FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=5e-16 swissprot:P24073; FLIY_BACSU FLAGELLAR MOTOR SWITCH PROTEIN FLIY; E=8e-16 swissprot:P26419; FLIN_SALTY FLAGELLAR MOTOR SWITCH PROTEIN FLIN; E=2e-15 COG: BS_fliY_2; COG1886 Flagellar motor switch/type III secretory pathway; E=6e-17 PFAM: PF01052; Surface presentation of antigens (SP; E=2.5e-25. (141 aa)
RB9276Flagellar protein; Best DB hits: BLAST: swissprot:P49080; AKH2_MAIZE BIFUNCTIONAL ASPARTOKINASEHOMOSERINE; E=0.43. (233 aa)
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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