STRINGSTRING
rbsA rbsA rbsC rbsC RB10898 RB10898 mntB mntB mntB-2 mntB-2 mntA mntA mtsA mtsA oppF oppF oppD oppD oppC oppC oppB oppB oppA oppA lolD lolD RB2209 RB2209 rbsD rbsD rbsB rbsB rbsA-2 rbsA-2 rbsC-2 rbsC-2 nrtC nrtC nrtB nrtB nrtC-2 nrtC-2 nrtD nrtD RB5152 RB5152 RB531 RB531 RB5826 RB5826 rbsC-3 rbsC-3 rbsA-3 rbsA-3 rbsB-2 rbsB-2 RB6469 RB6469 natB natB lolC lolC lolD-2 lolD-2 RB7134 RB7134 RB7135 RB7135 pstB pstB pstA pstA pstC pstC sphX sphX livK livK rbsB-3 rbsB-3 natA natA natB-2 natB-2 RB7903 RB7903 RB8828 RB8828 rbsC-4 rbsC-4 rbsA-4 rbsA-4 syrD syrD
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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gene neighborhood
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Your Input:
rbsAPMID: 7921236 best DB hits: BLAST: swissprot:P36947; RBSA_BACSU RIBOSE TRANSPORT ATP-BINDING PROTEIN; E=4e-92 embl:CAB66285.1; (AL136519) ABC transporter protein, ATP binding; E=2e-90 gb:AAK05735.1; AE006394_5 (AE006394) ribose ABC transporter ATP; E=1e-89 COG: BS_rbsA; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=4e-93 PFAM: PF02239; Cytochrome D1 heme domain; E=0.31 PF00005; ABC transporter; E=3e-50. (555 aa)
rbsCRibose transport system permease protein; PMID: 7921236 PMID: 9922273 best DB hits: BLAST: embl:CAB66286.1; (AL136519) bifunctional carbohydrate binding and; E=8e-26 swissprot:P36948; RBSC_BACSU RIBOSE TRANSPORT SYSTEM PERMEASE; E=1e-23 pir:S72834; hypothetical protein B1620_F2_68 - Mycobacterium leprae; E=2e-23 COG: BS_rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-23 yphD; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=3e-23 VCA0129; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-23. (353 aa)
RB10898PMID: 10360571 best DB hits: BLAST: pir:A72417; sugar ABC transporter, periplasmic sugar-binding protein; E=2e-17 ddbj:BAB07559.1; (AP001520) sugar ABC transporter (sugar-binding; E=3e-15 ddbj:BAB07167.1; (AP001518) sugar ABC transporter (sugar-binding; E=4e-09 COG: TM0114; COG1879 Periplasmic sugar-binding proteins; E=2e-18. (366 aa)
mntBManganese ABC transporter permease protein; PMID: 7743991 best DB hits: BLAST: pir:E69992; conserved hypothetical protein ytgD - Bacillus subtilis; E=3e-41 ddbj:BAB05109.1; (AP001511) BH1390~unknown conserved protein in; E=2e-32 gb:AAD56938.1; AF180520_3 (AF180520) integral membrane protein; E=3e-28 COG: BS_ytgD; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=3e-42 Rv2788; COG1321 Mn-dependent transcriptional regulator; E=3e-10 BH1395; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=5e-10 PFAM: PF00950; ABC 3 transport family; E=1.1e-17 PF02742; Iron dependent repr [...] (482 aa)
mntB-2PMID: 7743991 best DB hits: BLAST: pir:D69992; ABC transporter (membrane protein) homolog ytgC -; E=8e-45 pir:B71357; probable ABC transporter, permease protein (troC) -; E=5e-22 pir:A72089; integral membrane protein - Chlamydophila pneumoniae; E=4e-21 COG: BS_ytgC; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=8e-46 CPn0347_2; COG1321 Mn-dependent transcriptional regulator; E=2e-07 TM0125; COG1108 ABC-type Mn2+/Zn2+ transport systems, permease; E=3e-07 PFAM: PF00950; ABC 3 transport family; E=1.6e-72 PF02742; Iron dependent repressor, metal; E=1.6e-07. (444 aa)
mntAPMID: 7743991 best DB hits: BLAST: pir:C69992; ABC transporter (ATP-binding protein) homolog ytgB -; E=3e-73 pir:A71357; probable ABC transporter, ATP-binding protein (troB) -; E=1e-70 pir:T45470; ATP-binding ABC transport protein [imported] -; E=9e-58 COG: BS_ytgB; COG1121 ABC-type Mn/Zn transport systems, ATPase component; E=3e-74 BS_yfmF; COG1120 ABC-type cobalamin/Fe3+-siderophores transport; E=8e-24 PH1653; COG1121 ABC-type Mn/Zn transport systems, ATPase component; E=5e-23 PFAM: PF02463; SMC domain N terminal domain; E=0.17 PF00005; ABC transporter; E=7.9e-50. (280 aa)
mtsAPMID: 7743991 best DB hits: BLAST: pir:B69992; ABC transporter (membrane protein) homolog ytgA -; E=7e-66 pdb:1TOA; A Chain A, Periplasmic Zinc Binding Protein Troa From; E=3e-50 gb:AAA92353.1; (U16363) Tromp1 [Treponema pallidum]; E=3e-50 COG: BS_ytgA; COG0803 ABC-type Mn/Zn transport system, periplasmic; E=7e-67 PFAM: PF01297; Periplasmic solute binding prot; E=3.6e-103; Belongs to the bacterial solute-binding protein 9 family. (366 aa)
oppFOligopeptide transport ATP-binding protein OppF; PMID: 1738314 PMID: 9097039 best DB hits: BLAST: embl:CAC05751.1; (AL391751) putative peptide transport system; E=6e-96 ddbj:BAB07364.1; (AP001519) oligopeptide ABC transporter; E=1e-92 pir:B72424; oligopeptide ABC transporter, ATP-binding protein -; E=3e-90 COG: BH3645; COG1124 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-93 VNG2526G; COG1123 ATPase components of uncharacterized ABC-type; E=3e-84 BH0027; COG1124 ABC-type dipeptide/oligopeptide/nickel transport; E=3e-84 PFAM: PF00485; Phosphoribulokinase / Uridine; E=0.17 PF000 [...] (353 aa)
oppDOligopeptide transport ATP-binding protein OppD; PMID: 1738314 PMID: 1901616 best DB hits: BLAST: gb:AAG22037.1; AF305387_4 (AF305387) OppD [Bacillus thuringiensis]; E=2e-95 pir:H75380; peptide ABC transporter, ATP-binding protein -; E=8e-93 gb:AAA62691.1; (M57689) sporulation protein [Bacillus subtilis]; E=1e-92 COG: DR1568; COG0444 ABC-type dipeptide/oligopeptide/nickel transport; E=7e-94 Rv1281c; COG1123 ATPase components of uncharacterized ABC-type; E=5e-80 TM1064; COG0444 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-78 PFAM: PF01580; FtsK/SpoIIIE family; E=0.62 PF00005; [...] (361 aa)
oppCPMID: 1738314 PMID: 1901616 best DB hits: BLAST: pir:D82242; oligopeptide ABC transporter, permease protein VC1093; E=4e-50 swissprot:P45053; OPPC_HAEIN OLIGOPEPTIDE TRANSPORT SYSTEM; E=1e-46 pir:D70141; oligopeptide ABC transporter, permease protein (oppC-1); E=5e-46 COG: VC1093; COG1173 ABC-type dipeptide/oligopeptide/nickel transport; E=4e-51 PFAM: PF00528; Binding-protein-dependent transpor; E=9.1e-10. (411 aa)
oppBOligopeptide transport system permease protein OppB; PMID: 1738314 PMID: 2187863 best DB hits: BLAST: ddbj:BAA14776.1; (D90763) Oligopeptide transport system permease; E=8e-56 swissprot:P31132; OPPB_ECOLI OLIGOPEPTIDE TRANSPORT SYSTEM; E=1e-55 pir:B38447; oligopeptide permease oppB homolog - Bacillus subtilis; E=2e-55 COG: oppB; COG0601 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-56 PFAM: PF00528; Binding-protein-dependent transpor; E=0.00032. (309 aa)
oppAOligopeptide-binding protein OppA; PMID: 1738314 PMID: 1901616 best DB hits: BLAST: swissprot:P24141; OPPA_BACSU OLIGOPEPTIDE-BINDING PROTEIN OPPA; E=1e-60 pir:A38447; oligopeptide ABC transport system substrate-binding; E=1e-60 embl:CAB96044.1; (AJ250012) surface antigen [Borrelia afzelii]; E=6e-60 COG: BS_oppA; COG0747 ABC-type dipeptide/oligopeptide/nickel transport; E=1e-61 PFAM: PF00496; Bacterial extracellular solute-bind; E=1.3e-13. (655 aa)
lolDLipoprotein releasing system ATP-binding protein lolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (229 aa)
RB2209Hypothetical protein-signal peptide and transmembrane prediction. (413 aa)
rbsDHigh affinity ribose transport protein rbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (135 aa)
rbsBPMID: 6313683 PMID: 3011793 PMID: 1583688 PMID: 7982928 best DB hits: BLAST: pir:C72311; ribose ABC transporter, periplasmic ribose-binding; E=7e-89 pir:C82497; ribose ABC transporter, periplasmic D-ribose-binding; E=1e-48 pir:JGEBRT; D-ribose-binding protein - Salmonella typhimurium; E=1e-47 COG: TM0958; COG1879 Periplasmic sugar-binding proteins; E=6e-90 BH3727; COG1609 Transcriptional regulators; E=5e-11 yphF; COG1879 Periplasmic sugar-binding proteins; E=1e-10 PFAM: PF00532; Periplasmic binding proteins; E=0.0014 PF00534; Glycosyl transferases group 1; E=0.11 PF00532; Periplasmic b [...] (335 aa)
rbsA-2Ribose ABC transporter, ATP-binding protein rbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (511 aa)
rbsC-2Ribose transport system permease protein rbsC; PMID: 7921236 PMID: 9384377 best DB hits: BLAST: pir:D72314; ribose ABC transporter, permease protein - Thermotoga; E=3e-57 pir:B69690; ribose ABC transporter (permease) rbsC - Bacillus; E=6e-41 pir:B82497; ribose ABC transporter, permease protein VCA0129; E=2e-40 COG: TM0955; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-58 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=6e-35 TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=9e-30 PFAM: PF02653; Branched-chain amino acid transp; E=3.8e-10. (323 aa)
nrtCNitrate transport ATP-binding protein; PMID: 9495773 PMID: 8437564 best DB hits: BLAST: swissprot:P73450; NRTC_SYNY3 NITRATE TRANSPORT ATP-BINDING PROTEIN; E=3e-61 gb:AAB86900.1; (L27431) nitrate transporter component; NasF; E=2e-51 pir:S75959; nitrate transport protein C-1 - Synechocystis sp; E=6e-49 COG: sll1452_2; COG0715 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=3e-62. (553 aa)
nrtBNitrate transport permease protein; PMID: 8437564 best DB hits: BLAST: ddbj:BAA21794.1; (AB000100) intrinsic membrane protein; E=6e-30 swissprot:P38044; NRTB_SYNP7 NITRATE TRANSPORT PERMEASE PROTEIN; E=4e-29 gb:AAB86903.1; (L27431) nitrate transporter component; NasE; E=1e-27 COG: sll1451; COG0600 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=9e-28 BB0145; COG1174 ABC-type proline/glycine betaine transport systems,; E=1e-05 PFAM: PF00528; Binding-protein-dependent transpor; E=8.5e-12. (371 aa)
nrtC-2Nitrate transport ATP-binding protein; PMID: 8437564 best DB hits: BLAST: pir:S58789; ATP binding protein nrtC - oscillatoriacean; E=4e-60 swissprot:P38045; NRTC_SYNP7 NITRATE TRANSPORT ATP-BINDING PROTEIN; E=2e-59 pir:S75959; nitrate transport protein C-1 - Synechocystis sp; E=9e-59 COG: sll1453; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=6e-59 NMB0610; COG1130 ABC-type sugar/spermidine/putrescine transport; E=1e-35 PA2308; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-35 PFAM: PF00485; Phosphoribulokinase / Uridine kinase; E=0.18 PF00005; ABC transporter [...] (332 aa)
nrtDPMID: 8437564 best DB hits: BLAST: pir:S75959; nitrate transport protein C-1 - Synechocystis sp; E=1e-61 pir:S58789; ATP binding protein nrtC - oscillatoriacean; E=1e-61 pir:S77386; nitrate transport protein D-3 - Synechocystis sp.; E=2e-61 COG: sll1453; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=2e-62 PA3254; COG1130 ABC-type sugar/spermidine/putrescine transport; E=4e-29 PA2329; COG1116 ABC-type nitrate/sulfonate/taurine/bicarbonate; E=4e-28 PFAM: PF00005; ABC transporter; E=3.5e-57. (281 aa)
RB5152ABC transporter, ATP-binding protein; PMID: 2229036 best DB hits: BLAST: swissprot:P33982; YHBG_AZOCA PROBABLE ABC TRANSPORTER ATP-BINDING; E=2e-66 gb:AAA80299.1; (U23471) ABC-type permease homolog [Rhizobium; E=1e-64 swissprot:P25885; YHBG_RHIME PROBABLE ABC TRANSPORTER ATP-BINDING; E=7e-63 COG: DR2134; COG1137 ABC-type (unclassified) transport system, ATPase; E=2e-61 PA1071; COG0411 High-affinity branched-chain amino acid transport; E=1e-37 MTH1370; COG1131 ABC-type multidrug transport system, ATPase; E=3e-35 PFAM: PF00005; ABC transporter; E=3.8e-59. (317 aa)
RB531Iron (III) transport system (iron (III)-binding protein); PMID: 2404942 best DB hits: BLAST: pir:S75102; hypothetical protein sll0237 - Synechocystis sp. (strain; E=7e-43 ddbj:BAB04232.1; (AP001508) iron (III) transport system (iron; E=9e-24 ddbj:BAA75385.1; (AB013374) Yvfk [Bacillus halodurans]; E=2e-21 COG: sll0237; COG1840 ABC-type thiamine transport systems, periplasmic; E=6e-44 VC1424; COG0687 Spermidine/putrescine-binding periplasmic protein; E=7e-04 PFAM: PF01547; Bacterial extracellular solut; E=0.027. (352 aa)
RB5826Conserved hypothetical protein-putative permease; PMID: 8905231 best DB hits: BLAST: pir:S75996; hypothetical protein - Synechocystis sp. (strain PCC; E=2e-05 pir:S77272; hypothetical protein slr0882 - Synechocystis sp. (strain; E=0.023 pir:F72217; conserved hypothetical protein - Thermotoga maritima; E=0.13 COG: sll0496; COG0795 Predicted permeases; E=2e-06. (398 aa)
rbsC-3Ribose transport system permease protein RbsC; PMID: 7921236 best DB hits: BLAST: pir:H83402; membrane protein component of ABC ribose transporter; E=2e-51 gb:AAK02238.1; (AE006050) RbsC [Pasteurella multocida]; E=2e-24 swissprot:P44736; RBSC_HAEIN RIBOSE TRANSPORT SYSTEM PERMEASE; E=3e-24 COG: PA1948; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=1e-52 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=2e-20 TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=5e-17 PFAM: PF02653; Branched-chain amino acid transp; E=0.58. (326 aa)
rbsA-3PMID: 3086314 best DB hits: BLAST: pir:G83402; ribose transport protein RbsA PA1947 [imported] -; E=1e-103 gb:AAK05735.1; AE006394_5 (AE006394) ribose ABC transporter ATP; E=3e-85 pir:E72314; ribose ABC transporter, ATP-binding protein - Thermotoga; E=4e-83 COG: PA1947; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=1e-104 PFAM: PF00005; ABC transporter; E=4.5e-45. (522 aa)
rbsB-2D-ribose-binding periplasmic protein; PMID: 6313683 best DB hits: BLAST: pir:F83402; binding protein component precursor of ABC ribose; E=4e-88 gb:AAK03409.1; (AE006170) unknown [Pasteurella multocida]; E=3e-42 pir:C82497; ribose ABC transporter, periplasmic D-ribose-binding; E=6e-29 COG: PA1946; COG1879 Periplasmic sugar-binding proteins; E=4e-89 BH3727; COG1609 Transcriptional regulators; E=4e-09 HI1111; COG1879 Periplasmic sugar-binding proteins; E=5e-08 PFAM: PF00532; Periplasmic binding proteins; E=1.3e-11. (377 aa)
RB6469Best DB hits: BLAST: pir:F82572; sodium ABC transporter ATP-binding protein XF2329; E=8e-44 swissprot:P46903; NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA; E=2e-40 pir:B75459; sodium extrusion protein NatA - Deinococcus radiodurans; E=3e-39 COG: XF2329; COG1131 ABC-type multidrug transport system, ATPase; E=8e-45 ybhF; COG1131 ABC-type multidrug transport system, ATPase component; E=7e-32 PFAM: PF00448; SRP54-type protein, GTPase do; E=0.26 PF00005; ABC transporter; E=6.2e-51. (252 aa)
natBPMID: 10567266 best DB hits: BLAST: pir:A75459; sodium extrusion protein NatB - Deinococcus radiodurans; E=1e-09 swissprot:P46904; NATB_BACSU PROTEIN NATB -----pir: B69666; E=3e-07 ddbj:BAA22237.1; (AB000617) NatB [Bacillus subtilis]; E=0.002 COG: DR0926; COG1668 ATP-dependent Na+ efflux pump membrane component; E=1e-10 ybhS; COG0842 Permease component of an ABC-transporter; E=0.003 PFAM: PF02517; CAAX amino terminal protease family; E=1.8e-15. (701 aa)
lolCProbable lipoprotein releasing system transmembrane protein LolC; PMID: 10783239 best DB hits: BLAST: pir:E71676; hypothetical protein RP699 - Rickettsia prowazekii; E=2e-19 pir:C83271; conserved hypothetical protein PA2986 [imported] -; E=1e-17 pir:E83271; conserved hypothetical protein PA2988 [imported] -; E=4e-16 COG: RP699; COG0577 Predicted permease; E=2e-20 PFAM: PF02687; Predicted permease; E=3.5e-39. (532 aa)
lolD-2Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (255 aa)
RB7134PMID: 10710307 best DB hits: BLAST: pir:G81022; ABC transporter, ATP-binding protein NMB1966 [imported]; E=1e-40 pir:B81966; probable ABC transport ATP-binding protein NMA0485; E=2e-40 swissprot:O06784; MKL_MYCTU POSSIBLE RIBONUCLEOTIDE TRANSPORT; E=1e-38 COG: NMB1966; COG1127 Uncharacterized ABC-type transport system, ATPase; E=1e-41 PA2350; COG1135 Uncharacterized ABC-type transport system ATPase; E=1e-32 XF0421; COG1127 Uncharacterized ABC-type transport system, ATPase; E=3e-32 PFAM: PF00006; ATP synthase alpha/beta family, n; E=0.092 PF00485; Phosphoribulokinase / Uridine kin; E=0. [...] (294 aa)
RB7135Probable permease of ABC transporter; PMID: 10984043 best DB hits: BLAST: pir:G71718; hypothetical protein RP096 - Rickettsia prowazekii; E=4e-38 pir:E70331; conserved hypothetical protein aq_355 - Aquifex aeolicus; E=6e-37 pir:S74989; hypothetical protein slr1045 - Synechocystis sp. (strain; E=5e-35 COG: RP096; COG0767 Permease component of an ABC-transporter; E=3e-39 PFAM: PF02405; Domain of unknown function DUF140; E=4.8e-79; Belongs to the MlaE permease family. (296 aa)
pstBProbable phosphate transport ATP-binding protein PSTB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (282 aa)
pstAPhosphate ABC transporter (permease); PMID: 99411980 best DB hits: BLAST: ddbj:BAB06711.1; (AP001517) phosphate ABC transporter (permease); E=1e-26 gb:AAB89888.1; (AE001010) phosphate ABC transporter, permease; E=1e-25 pir:D82504; phosphate ABC transporter, permease protein VCA0072; E=6e-17 COG: BH2992; COG0581 ABC-type phosphate transport system, permease; E=9e-28 MTH1729; COG0573 ABC-type phosphate transport system, permease; E=1e-16 sll0682; COG0581 ABC-type phosphate transport system, permease; E=4e-16 PFAM: PF00060; Ligand-gated ion channel; E=0.035 PF00528; Binding-protein-depend [...] (422 aa)
pstCPhosphate ABC transporter (permease); Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (315 aa)
sphXPhosphate ABC transporter, periplasmic phosphate-binding protein; PMID: 95075296 PMID: 7741855 best DB hits: BLAST: swissprot:P39665; SPHX_SYNP7 SPHX PROTEIN PRECURSOR -----pir:; E=9e-59 swissprot:Q55200; SPHX_SYNY3 SPHX PROTEIN HOMOLOG PRECURSOR; E=4e-56 gb:AAB89890.1; (AE001010) phosphate ABC transporter, periplasmic; E=3e-53 COG: sll0679; COG0226 ABC-type phosphate transport system, periplasmic; E=4e-57 PFAM: PF01449; Phosphate-binding protein; E=2.2e-64. (310 aa)
livKPMID: 97404404 best DB hits: BLAST: pir:T03460; probable leucineisoleucine/valine-binding protein; E=1e-36 pir:H75444; branched-chain amino acid ABC transporter, periplasmic; E=4e-04 pir:G75579; branched-chain amino acid ABC transporter, periplasmic; E=9e-04 COG: DR1038; COG0683 Periplasmic leucine/isoleucine/valine-binding; E=4e-05. (414 aa)
rbsB-3Bifunctional carbohydrate binding and transport protein; PMID: 97000351 PMID: 8843436 best DB hits: BLAST: embl:CAB66286.1; (AL136519) bifunctional carbohydrate binding and; E=2e-20 gb:AAK03409.1; (AE006170) unknown [Pasteurella multocida]; E=4e-20 pir:A72417; sugar ABC transporter, periplasmic sugar-binding protein; E=3e-19 COG: TM0114; COG1879 Periplasmic sugar-binding proteins; E=3e-20 PFAM: PF00532; Periplasmic binding proteins; E=0.038. (438 aa)
natABest DB hits: BLAST: pir:C69049; ABC transporter (ATP-binding protein) - Methanobacterium; E=5e-47 swissprot:P46903; NATA_BACSU ATP-BINDING TRANSPORT PROTEIN NATA; E=2e-46 pir:F82572; sodium ABC transporter ATP-binding protein XF2329; E=5e-46 COG: MTH1370; COG1131 ABC-type multidrug transport system, ATPase; E=5e-48 PFAM: PF02223; Thymidylate kinase; E=0.42 PF00005; ABC transporter; E=1.6e-61. (273 aa)
natB-2Best DB hits: BLAST: pir:A75459; sodium extrusion protein NatB - Deinococcus radiodurans; E=2e-15 swissprot:P46904; NATB_BACSU PROTEIN NATB ----- pir: B69666; E=1e-10 ddbj:BAA22237.1; (AB000617) NatB [Bacillus subtilis]; E=5e-05 COG: DR0926; COG1668 ATP-dependent Na+ efflux pump membrane component; E=1e-16 BS_ydiL; COG1266 Predicted metal-dependent membrane protease; E=1e-04 PFAM: PF02517; CAAX amino terminal protease family; E=1.1e-19. (773 aa)
RB7903Conserved hypothetical protein-putative ABC transporter; PMID: 97221617 best DB hits: BLAST: gb:AAK03847.1; (AE006213) unknown [Pasteurella multocida]; E=2e-43 pir:E70943; probable ABC-type sugar transport protein -; E=1e-42 embl:CAB77334.1; (AL160331) ABC transporter ATP-binding protein; E=1e-42 COG: Rv2038c; COG1130 ABC-type sugar/spermidine/putrescine transport; E=9e-44 PA0280; COG1118 ABC-type sulfate/molybdate transport systems, ATPase; E=5e-41 BH1140; COG1130 ABC-type sugar/spermidine/putrescine transport; E=5e-41 PFAM: PF00071; Ras family; E=0.056 PF00005; ABC transporter; E=8.4e-47. (408 aa)
RB8828PMID: 8590279 best DB hits: BLAST: swissprot:P55660; Y4TF_RHISN PROBABLE AMINO-ACID ABC TRANSPORTER; E=0.095. (552 aa)
rbsC-4Ribose ABC transporter permease protein; PMID: 11337471 PMID: 7921236 best DB hits: BLAST: gb:AAK05734.1; AE006394_4 (AE006394) ribose ABC transporter; E=1e-16 pir:G72416; sugar ABC transporter, permease protein - Thermotoga; E=3e-16 pir:B69690; ribose ABC transporter (permease) rbsC - Bacillus; E=3e-16 COG: TM0112; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-17 rbsC; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport; E=2e-14 VCA0129; COG1172 Ribose/xylose/arabinose/galactoside ABC-type; E=3e-14 PFAM: PF02653; Branched-chain amino acid transp; E=6e-09. (436 aa)
rbsA-4Putative ATP-binding protein of ribose ABC transport system; PMID: 3011793 PMID: 3086314 best DB hits: BLAST: gb:AAG59288.1; AE005642_7 (AE005642) putative ATP-binding protein; E=8e-88 ddbj:BAB06041.1; (AP001515) sugar ABC transporter (ATP-binding; E=1e-86 ddbj:BAB07449.1; (AP001519) ribose ABC transporter (ATP-binding; E=2e-86 COG: BH2322; COG1129 ABC-type sugar (aldose) transport system, ATPase; E=1e-87 PFAM: PF00005; ABC transporter; E=2.1e-51. (507 aa)
syrDPMID: 8231810 best DB hits: BLAST: swissprot:P33951; SYRD_PSESY ATP-BINDING PROTEIN SYRD -----; E=8e-65 pir:G83345; pyoverdine biosynthesis protein PvdE PA2397 [imported] -; E=8e-65 pir:S54001; pyoverdine synthetase E - Pseudomonas aeruginosa -----; E=9e-64 COG: PA2397; COG1132 ABC-type multidrug/protein/lipid transport system,; E=8e-66 APE1253; COG1136 ABC-type (unclassified) transport system, ATPase; E=2e-09 XF1081; COG1132 ABC-type multidrug/protein/lipid transport system,; E=2e-07 PFAM: PF00664; ABC transporter transmembrane; E=0.25 PF00470; RecF protein; E=0.13 PF02223; Thymidylat [...] (547 aa)
Your Current Organism:
Rhodopirellula baltica
NCBI taxonomy Id: 243090
Other names: Pirellula sp. 1, R. baltica SH 1, Rhodopirellula baltica SH 1, Rhodopirellula baltica str. SH 1, Rhodopirellula baltica strain SH 1
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