STRINGSTRING
MJ_0123 MJ_0123 MJ_0124 MJ_0124 MJ_0125 MJ_0125 MJ_0126 MJ_0126 MJ_0127 MJ_0127 MJ_0128 MJ_0128 MJ_0129 MJ_0129 MJ_0130 MJ_0130 MJ_0131 MJ_0131 MJ_0132 MJ_0132 MJ_0432 MJ_0432 MJ_0433 MJ_0433 MJ_0434 MJ_0434 MJ_0435 MJ_0435 MJ_0686 MJ_0686 mjaIM mjaIM MJ_0986 MJ_0986 mjaVIRP mjaVIRP mjaVIM mjaVIM MJ_1210 MJ_1210 MJ_1211 MJ_1211 MJ_1213 MJ_1213 MJ_1214 MJ_1214 MJ_1215 MJ_1215 MJ_1216 MJ_1216 MJ_1217 MJ_1217 MJ_1218 MJ_1218 MJ_1219 MJ_1219 MJ_1220 MJ_1220 MJ_1221 MJ_1221 mjaIVR mjaIVR mjaIVMP mjaIVMP MJ_1379 MJ_1379 MJ_1380 MJ_1380 MJ_1531 MJ_1531 rqcH rqcH MJ_1641 MJ_1641
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MJ_0123Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0123; To M.jannaschii MJ1213 and A.aeolicus AA15. (110 aa)
MJ_0124Type I restriction-modification enzyme 2, R subunit; Similar to GB:L42023 PID:1007240 PID:1221415 PID:1205524 PID:1574743 percent identity: 32.31; identified by sequence similarity; putative; To M.jannaschii MJ1214. (1075 aa)
MJ_0125Conserved hypothetical protein; Similar to PID:1652090 percent identity: 31.43; identified by sequence similarity; putative; Belongs to the UPF0331 family. (116 aa)
MJ_0126Conserved hypothetical protein; Similar to PID:1653122 percent identity: 32.61; identified by sequence similarity; putative; Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family. (98 aa)
MJ_0127Conserved hypothetical protein; Similar to PID:1652090 percent identity: 32.61; identified by sequence similarity; putative; Belongs to the UPF0331 family. (121 aa)
MJ_0128Conserved hypothetical protein; Similar to PID:1653122 percent identity: 36.17; identified by sequence similarity; putative; Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family. (98 aa)
MJ_0129Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0129. (170 aa)
MJ_0130Type I restriction-modification enzyme 2, S subunit; The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to the same target sequence but cutting the DNA some distance from this site. Whether the DNA is cut or modified depends on the methylation state of the target sequence. When the target site is unmodified, the DNA is cut. When the target site is hemimethylated, the complex acts as a mai [...] (343 aa)
MJ_0131Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0131. (103 aa)
MJ_0132Type I restriction-modification enzyme 2, M subunit; Similar to GB:L25415 PID:496158 percent identity: 39.36; identified by sequence similarity; putative; Belongs to the N4/N6-methyltransferase family. (220 aa)
MJ_0432Conserved hypothetical protein; Similar to GP:1707720 percent identity: 34.18; identified by sequence similarity; putative. (92 aa)
MJ_0433Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0433. (175 aa)
MJ_0434Conserved hypothetical protein; Similar to PID:1652090 percent identity: 30.69; identified by sequence similarity; putative; In the N-terminal section; belongs to the UPF0331 family. (222 aa)
MJ_0435Conserved hypothetical protein; Similar to PID:1653122 percent identity: 36.36; identified by sequence similarity; putative; Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family. (93 aa)
MJ_0686Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0686. (580 aa)
mjaIMModification methylase, type II R/M system 1; This methylase recognizes the double-stranded sequence CTAG, causes specific methylation on C-1 on both strands, and protects the DNA from cleavage by the MjaI endonuclease; Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily. (303 aa)
MJ_0986Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0986. (76 aa)
mjaVIRPConserved hypothetical protein; Recognizes the double-stranded unmethylated sequence CCGG; To H.pylori HP0262. (226 aa)
mjaVIMModification methylase, type II R/M system; This methylase recognizes the double-stranded sequence CCGG, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the MjaVI endonuclease; Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily. (194 aa)
MJ_1210Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 46.03; identified by sequence similarity; putative. (258 aa)
MJ_1211Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1211. (116 aa)
MJ_1213Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1213; To M.jannaschii MJ0123 and A.aeolicus AA15. (110 aa)
MJ_1214Type I restriction-modification enzyme 1, R subunit; Similar to GB:L42023 PID:1007240 PID:1221415 PID:1205524 PID:1574743 percent identity: 27.55; identified by sequence similarity; putative. (1018 aa)
MJ_1215Conserved hypothetical protein; Similar to PID:1653122 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family. (86 aa)
MJ_1216Conserved hypothetical protein; Similar to PID:1652090 percent identity: 30.48; identified by sequence similarity; putative; Belongs to the UPF0331 family. (121 aa)
MJ_1217Conserved hypothetical protein; Similar to PID:1653122 percent identity: 33.70; identified by sequence similarity; putative; Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family. (98 aa)
MJ_1218Type I restriction-modification enzyme 1, S subunit; Identified by sequence similarity; putative. (425 aa)
MJ_1219Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1219. (104 aa)
MJ_1220Type I restriction-modification enzyme 1, M subunit; Similar to GB:L25415 PID:496158 percent identity: 32.85; identified by sequence similarity; putative. (578 aa)
MJ_1221Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1221. (299 aa)
mjaIVRHypothetical protein; Recognizes the double-stranded unmethylated sequence GTNNAC. (245 aa)
mjaIVMPModification methylase, type II R/M system; This methylase recognizes the double-stranded sequence GTNNAC, causes specific methylation on ? on both strands, and protects the DNA from cleavage by the MjaIV endonuclease. (298 aa)
MJ_1379Conserved hypothetical protein; Similar to PID:1653122 percent identity: 38.95; identified by sequence similarity; putative; Belongs to the M.jannaschii MJ0126/MJ0128/MJ0141/MJ0435/MJ0604/MJ1215/MJ1217/MJ1305/MJ1379 family. (100 aa)
MJ_1380Conserved hypothetical protein; Similar to PID:1652090 percent identity: 35.71; identified by sequence similarity; putative; Belongs to the UPF0331 family. (78 aa)
MJ_1531Type I restriction-modification enzyme, S subunit, putative; Similar to GB:X17591 PID:40467 percent identity: 37.84; identified by sequence similarity; putative; To M.jannaschii MJ0130 and MJ1218. (425 aa)
rqcHConserved hypothetical protein; Probably part of the ribosome quality control system (RQC). May mediate the addition of alanine residues (Ala tailing) to incompletely synthesized nascent chains from stalled ribosomes, leading to their degradation; Belongs to the NEMF family. (671 aa)
MJ_1641Repressor protein; Similar to GB:L10328 SP:P07656 GB:K01992 GB:X02723 PID:145415 percent identity: 25.00; identified by sequence similarity; putative. (287 aa)
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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