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metE metE mtrD mtrD mtrE mtrE MJ_0841 MJ_0841 cbiH cbiH trm5b trm5b MJ_0928 MJ_0928 trm1 trm1 cobA cobA mjaIM mjaIM rsmA rsmA MJ_0563 MJ_0563 mjaIIIM mjaIIIM MJ_0619 MJ_0619 flpA flpA trmG10 trmG10 MJ_0757 MJ_0757 cbiL cbiL MJ_1653 MJ_1653 MJ_1649 MJ_1649 trmY trmY cbiF cbiF ogt ogt cbiE cbiE taw3 taw3 mjaVM mjaVM MJ_1487 MJ_1487 trmJ trmJ mtrC mtrC mjaIIM mjaIIM MJ_1385 MJ_1385 rlmE rlmE MJ_1371 MJ_1371 mjaIVMP mjaIVMP dphB dphB MJ_0882 MJ_0882 MJ_1252 MJ_1252 MJ_1220 MJ_1220 mjaVIM mjaVIM MJ_1200 MJ_1200 cbiD cbiD trm4 trm4 MJ_0046 MJ_0046 MJ_0086 MJ_0086 cdhE cdhE trmI trmI pcm pcm cbiT cbiT trm14 trm14 thyA thyA nep1 nep1 mtrH mtrH mtrG mtrG mtrF mtrF mtrA mtrA mtrB mtrB
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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metE5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase (metE); Catalyzes the transfer of a methyl group to L-homocysteine resulting in methionine formation. Can use methylcobalamin and methylcobinamide as methyl donors, but methylcobalamin is not considered to be the physiological substrate (By similarity). (311 aa)
mtrDN5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit D (mtrD); Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (230 aa)
mtrEN5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit E (mtrE); Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (303 aa)
MJ_0841Conserved hypothetical protein; Radical SAM methyltransferase that is responsible for the C(5)-methylation of 'Arg-274' of the methyl-coenzyme M reductase (MCR) subunit alpha McrA. This post-translational methylation, despite being not essential in vivo, plays a role for the stability and structural integrity of MCR. (415 aa)
cbiHCobalamin biosynthesis precorrin-3 methylase (cbiH); Methyltransferase that likely catalyzes the ring contraction and methylation of C-17 in cobalt-factor III to form cobalt-factor IV. May also convert cobalt-precorrin-3 to cobalt-precorrin-4 (By similarity). (249 aa)
trm5bConserved hypothetical protein; Specifically methylates the N1 position of guanosine-37 in various tRNAs. (336 aa)
MJ_0928Protoporphyrinogen oxidase (hemK); Putative protein methyltransferase using S-adenosyl-L- methionine as the methyl donor. May methylate a Gln residue in target proteins (By similarity); Belongs to the eukaryotic/archaeal PrmC-related family. (197 aa)
trm1N2,N2-dimethylguanosine tRNA methyltransferase (trm1); Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (374 aa)
cobAuroporphyrin-III C-methyltransferase (cobA); Catalyzes both methylations at C-2 and C-7 of uroporphyrinogen III leading to precorrin-1 and precorrin-2; their oxidative esterification gives respectively factor I octamethyl ester and sirohydrochlorin. (253 aa)
mjaIMModification methylase, type II R/M system 1; This methylase recognizes the double-stranded sequence CTAG, causes specific methylation on C-1 on both strands, and protects the DNA from cleavage by the MjaI endonuclease; Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily. (303 aa)
rsmADimethyladenosine transferase (ksgA); Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. (275 aa)
MJ_0563Modification methylase, type II R/M system; Similar to SP:P50192 percent identity: 35.29; identified by sequence similarity; putative. (310 aa)
mjaIIIMModification methylase, type II R/M system 2; This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MjaIII endonuclease; Belongs to the N(4)/N(6)-methyltransferase family. (289 aa)
MJ_0619Conserved hypothetical protein; Is responsible for the addition of methyl groups at C-7 and C-9 of the pterin ring during methanopterin (MPT) biosynthesis. Catalyzes methylation of 7,8-dihydro-6-hydroxymethylpterin, likely using methylenetetrahydromethanopterin as a methyl group donor, via a radical-based mechanism. (506 aa)
flpAFibrillarin (fib); Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA. (230 aa)
trmG10Conserved hypothetical protein; Catalyzes the adenosylmethionine-dependent methylation of the exocyclic amino group (N(2)) of guanosine at position 10 of various tRNAs. Acts via a two-step process that leads to the formation of either N(2)-monomethyl (m(2)G) or N(2)-dimethylguanosine (m(2)(2)G) (By similarity); Belongs to the methyltransferase superfamily. Trm-G10 family. (351 aa)
MJ_0757Conserved hypothetical protein; Is able to catalyze the biosynthesis of dTMP using dUMP, tetrahydrofolate and formaldehyde in vitro, i.e. a reaction equivalent to that catalyzed by bacterial thymidylate synthases (EC 2.1.1.45). However, M.jannaschii like most methanogenic Archaea lacks folates, thus the physiological cosubstrate is unknown but is likely one of the non-methylated methanopterin biosynthetic intermediates. (260 aa)
cbiLCobalamin biosynthesis precorrin-2 methyltransferase (cbiL); Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway. (230 aa)
MJ_1653Conserved hypothetical protein; Similar to GB:X73124 SP:P39587 PID:413943 GB:AL009126 percent identity: 32.39; identified by sequence similarity; putative. (385 aa)
MJ_1649Conserved hypothetical protein; Similar to GP:1787201 percent identity: 32.18; identified by sequence similarity; putative. (387 aa)
trmYConserved hypothetical protein; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family. (205 aa)
cbiFCobalamin biosynthesis precorrin-3 methylase (cbiF); Catalyzes the methylation of C-11 in cobalt-precorrin-4 to form cobalt-precorrin-5A. (259 aa)
ogtmethylated-DNA-protein-cysteine methyltransferase, putative (ogt); Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (167 aa)
cbiECobalamin biosynthesis precorrin-6Y methylase (cbiE); Catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. (211 aa)
taw3Conserved hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that acts as a component of the wyosine derivatives biosynthesis pathway. Probably methylates N-4 position of wybutosine-86 to produce wybutosine-72; Belongs to the TYW3 family. (193 aa)
mjaVMModification methylase, type II R/M system; This methylase recognizes the double-stranded sequence GTAC, causes specific methylation on C-4 on both strands, and protects the DNA from cleavage by the MjaV endonuclease; Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily. (292 aa)
MJ_1487Conserved hypothetical protein; Similar to GP:1653565 percent identity: 32.68; identified by sequence similarity; putative. (426 aa)
trmJConserved hypothetical protein; Catalyzes the formation of 2'O-methylated cytidine (Cm32) at position 32 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. (230 aa)
mtrCN5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit C (mrtC); Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (265 aa)
mjaIIMModification methylase, type II R/M system; This methylase recognizes the double-stranded sequence GGNC, causes specific methylation on C-4 on both strands, and protects the DNA from cleavage by the MjaII endonuclease; Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily. (530 aa)
MJ_1385Conserved hypothetical protein; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family. (179 aa)
rlmECell division protein FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. (245 aa)
MJ_1371Methlytransferase; Similar to GP:2437836 percent identity: 39.09; identified by sequence similarity; putative; Belongs to the MtxX family. (244 aa)
mjaIVMPModification methylase, type II R/M system; This methylase recognizes the double-stranded sequence GTNNAC, causes specific methylation on ? on both strands, and protects the DNA from cleavage by the MjaIV endonuclease. (298 aa)
dphBDiphthine synthase (dph5); S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. (257 aa)
MJ_0882Conserved hypothetical protein; Probable methyltransferase that uses S-adenosylmethionine as the methyl donor. Binds neither NAD nor NADP in vitro. (197 aa)
MJ_1252gerC2 protein; Similar to GB:L14679 SP:P49016 PID:410740 percent identity: 29.52; identified by sequence similarity; putative; To M.jannaschii MJ0638 and MJ1123 and M.tuberculosis Rv2003c. (251 aa)
MJ_1220Type I restriction-modification enzyme 1, M subunit; Similar to GB:L25415 PID:496158 percent identity: 32.85; identified by sequence similarity; putative. (578 aa)
mjaVIMModification methylase, type II R/M system; This methylase recognizes the double-stranded sequence CCGG, causes specific methylation on C-? on both strands, and protects the DNA from cleavage by the MjaVI endonuclease; Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily. (194 aa)
MJ_1200Modification methylase, type II R/M system; Similar to SP:P05302 percent identity: 40.20; identified by sequence similarity; putative. (366 aa)
cbiDCobalamin biosynthesis protein (cbiD); Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (362 aa)
trm4Proliferating-cell nucleolar antigen, FMU/NOL1/NOP2 family; Catalyzes AdoMet-dependent formation of m5C in tRNA. Cytidine residue at either position 40 or position 48 is likely to be methylated; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (274 aa)
MJ_0046Conserved hypothetical protein; Similar to GB:L42023 SP:P45106 PID:1007078 PID:1221325 PID:1205444 percent identity: 24.82; identified by sequence similarity; putative; Belongs to the methyltransferase superfamily. (261 aa)
MJ_0086Unspecified methyltransferase; Similar to PIR:S21265 percent identity: 25.50; identified by sequence similarity; putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (372 aa)
cdhEacetyl-CoA decarbonylase/synthase, subunit gamma (cdhE); Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). (488 aa)
trmIL-isoaspartyl protein carboxyl methyltransferase isolog (pimT); Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. Belongs to the class I-like SAM-binding methyltransferase superfamily. TRM61 family. (282 aa)
pcmL-isoaspartyl protein carboxyl methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins (By similarity). (215 aa)
cbiTCobalamin biosynthesis precorrin-8W decarboxylase (cbiT); Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin-7. (183 aa)
trm14Conserved hypothetical protein; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the methylation of the guanosine nucleotide at position 6 (m2G6) in tRNA(Cys). (381 aa)
thyAThymidylate synthase (thyA); May catalyze the biosynthesis of dTMP using an unknown cosubstrate; Belongs to the thymidylate synthase family. Archaeal-type ThyA subfamily. (222 aa)
nep1Conserved hypothetical protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of pseudouridine at position 914 (Psi914) in 16S rRNA. Is not able to methylate uridine at this position. (205 aa)
mtrHN5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit H (mtrH); Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. MtrH catalyzes the transfer of the methyl group from methyl-tetrahydromethanopterin to the corrinoid prosthetic group of MtrA. (333 aa)
mtrGN5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit G (mtrG); Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (84 aa)
mtrFN5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit F (mtrF); Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (68 aa)
mtrAN5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit A (mtrA); Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step; Belongs to the MtrA family. (245 aa)
mtrBN5-methyl-tetrahydromethanopterin:coenzyme M methyltransferase, subunit B (mrtB); Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step. (103 aa)
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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