(13 nodes) Degradation of aromatic compounds network (Methylococcus capsulatus)

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Your Input:
	MCA0225	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355. (108 aa)
	MCA0351	Carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627. (108 aa)
	MCA0586	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355. (104 aa)
	MCA0775	Alcohol dehydrogenase, zinc-containing; Identified by similarity to OMNI:MT1911; match to protein family HMM PF00107. (342 aa)
	MCA0987	Rieske 2Fe-2S family protein; Identified by similarity to GP:17942398; match to protein family HMM PF00355. (106 aa)
	mmoX	Methane monooxygenase, A subunit, alpha chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds; Belongs to the TmoA/XamoA family. (527 aa)
	mmoY	Methane monooxygenase, A subunit, beta chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds. (389 aa)
	mmoB	Methane monooxygenase, B subunit; The B protein acts as a regulator of electron flow through the soluble mmo complex, switching the enzyme from an oxidase to a hydroxylase in the presence of the substrate; Belongs to the TmoD/XamoD family. (141 aa)
	mmoZ	Methane monooxygenase, A subunit, gamma chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds. (170 aa)
	mmoD	Methane monooxygenase, D subunit. (103 aa)
	mmoC	Methane monooxygenase, C subunit; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds. The component C is the iron-sulfur flavoprotein of sMMO. (348 aa)
	ubiX	3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (197 aa)
	MCA2776	Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. (380 aa)

Your Current Organism:

Methylococcus capsulatus

NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCA0225	MCA0586	MCA0225	MCA0586	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	0.911
MCA0225	MCA2776	MCA0225	MCA2776	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.	0.606
MCA0225	mmoX	MCA0225	MCA1194	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	Methane monooxygenase, A subunit, alpha chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds; Belongs to the TmoA/XamoA family.	0.426
MCA0225	mmoY	MCA0225	MCA1195	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	Methane monooxygenase, A subunit, beta chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds.	0.492
MCA0586	MCA0225	MCA0586	MCA0225	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	0.911
MCA0586	MCA2776	MCA0586	MCA2776	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.	0.606
MCA0586	mmoX	MCA0586	MCA1194	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	Methane monooxygenase, A subunit, alpha chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds; Belongs to the TmoA/XamoA family.	0.426
MCA0586	mmoY	MCA0586	MCA1195	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	Methane monooxygenase, A subunit, beta chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds.	0.492
MCA0987	MCA2776	MCA0987	MCA2776	Rieske 2Fe-2S family protein; Identified by similarity to GP:17942398; match to protein family HMM PF00355.	Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.	0.983
MCA0987	mmoX	MCA0987	MCA1194	Rieske 2Fe-2S family protein; Identified by similarity to GP:17942398; match to protein family HMM PF00355.	Methane monooxygenase, A subunit, alpha chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds; Belongs to the TmoA/XamoA family.	0.426
MCA0987	mmoY	MCA0987	MCA1195	Rieske 2Fe-2S family protein; Identified by similarity to GP:17942398; match to protein family HMM PF00355.	Methane monooxygenase, A subunit, beta chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds.	0.434
MCA2776	MCA0225	MCA2776	MCA0225	Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	0.606
MCA2776	MCA0586	MCA2776	MCA0586	Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.	Rieske 2Fe-2S family protein; Identified by similarity to GP:1754625; match to protein family HMM PF00355.	0.606
MCA2776	MCA0987	MCA2776	MCA0987	Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.	Rieske 2Fe-2S family protein; Identified by similarity to GP:17942398; match to protein family HMM PF00355.	0.983
MCA2776	mmoC	MCA2776	MCA1200	Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.	Methane monooxygenase, C subunit; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds. The component C is the iron-sulfur flavoprotein of sMMO.	0.499
mmoB	mmoC	MCA1196	MCA1200	Methane monooxygenase, B subunit; The B protein acts as a regulator of electron flow through the soluble mmo complex, switching the enzyme from an oxidase to a hydroxylase in the presence of the substrate; Belongs to the TmoD/XamoD family.	Methane monooxygenase, C subunit; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds. The component C is the iron-sulfur flavoprotein of sMMO.	0.988
mmoB	mmoD	MCA1196	MCA1199	Methane monooxygenase, B subunit; The B protein acts as a regulator of electron flow through the soluble mmo complex, switching the enzyme from an oxidase to a hydroxylase in the presence of the substrate; Belongs to the TmoD/XamoD family.	Methane monooxygenase, D subunit.	0.979
mmoB	mmoX	MCA1196	MCA1194	Methane monooxygenase, B subunit; The B protein acts as a regulator of electron flow through the soluble mmo complex, switching the enzyme from an oxidase to a hydroxylase in the presence of the substrate; Belongs to the TmoD/XamoD family.	Methane monooxygenase, A subunit, alpha chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds; Belongs to the TmoA/XamoA family.	0.999
mmoB	mmoY	MCA1196	MCA1195	Methane monooxygenase, B subunit; The B protein acts as a regulator of electron flow through the soluble mmo complex, switching the enzyme from an oxidase to a hydroxylase in the presence of the substrate; Belongs to the TmoD/XamoD family.	Methane monooxygenase, A subunit, beta chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds.	0.999
mmoB	mmoZ	MCA1196	MCA1198	Methane monooxygenase, B subunit; The B protein acts as a regulator of electron flow through the soluble mmo complex, switching the enzyme from an oxidase to a hydroxylase in the presence of the substrate; Belongs to the TmoD/XamoD family.	Methane monooxygenase, A subunit, gamma chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds.	0.997

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