STRINGSTRING
VC_1096 VC_1096 VC_2044 VC_2044 bolA bolA rlmG rlmG VC_2298 VC_2298 VC_2300 VC_2300
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VC_1096Conserved hypothetical protein; Identified by Glimmer2; putative. (315 aa)
VC_2044Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the glutaredoxin family. Monothiol subfamily. (110 aa)
bolAbolA protein; Transcriptional regulator that plays an important role in general stress response. (106 aa)
rlmGConserved hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. (416 aa)
VC_2298Lipoprotein, putative; Similar to GB:L42023 SP:P43782 PID:1003225 PID:1222077 PID:644853; identified by sequence similarity; putative. (206 aa)
VC_2300ampG protein, putative; Similar to GB:U00096 SP:P36670 PID:1773117 PID:1786636 PID:563855; identified by sequence similarity; putative. (462 aa)
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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