STRINGSTRING
VC_0037 VC_0037 uspB uspB VC_0152 VC_0152 VC_0153 VC_0153 VC_0567 VC_0567 VC_0765 VC_0765 VC_0871 VC_0871 VC_0872 VC_0872 VC_1153 VC_1153 VC_1208 VC_1208 matP matP zapC zapC mukB mukB mukE mukE mukF mukF VC_1722 VC_1722 VC_1731 VC_1731 VC_1841 VC_1841 VC_1871 VC_1871 VC_1892 VC_1892 VC_2073 VC_2073 VC_2112 VC_2112 VC_2238 VC_2238 VC_2264 VC_2264 crl crl VC_2276 VC_2276 VC_2346 VC_2346 VC_2473 VC_2473 VC_2550 VC_2550 VC_2567 VC_2567 zapB zapB VC_2739 VC_2739 VC_A0569 VC_A0569 VC_A0717 VC_A0717 VC_A0762 VC_A0762 VC_A0763 VC_A0763
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VC_0037Conserved hypothetical protein; Identified by Glimmer2; putative. (92 aa)
uspBConserved hypothetical protein; Identified by Glimmer2; putative. (107 aa)
VC_0152Transcriptional regulator, TetR family; Similar to GB:U00096 PID:1790401; identified by sequence similarity; putative. (213 aa)
VC_0153Conserved hypothetical protein; Identified by Glimmer2; putative. (123 aa)
VC_0567Conserved hypothetical protein; Identified by Glimmer2; putative. (145 aa)
VC_0765Conserved hypothetical protein; Identified by Glimmer2; putative. (77 aa)
VC_0871Hypothetical protein; Identified by Glimmer2; putative. (63 aa)
VC_0872Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0253 family. (67 aa)
VC_1153Conserved hypothetical protein; Identified by Glimmer2; putative. (202 aa)
VC_1208Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0263 family. (106 aa)
matPConserved hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain. (169 aa)
zapCConserved hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ. (180 aa)
mukBCell division protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily. (1491 aa)
mukEmukE protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF. (247 aa)
mukFmukF protein; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity. (445 aa)
VC_1722Conserved hypothetical protein; Identified by Glimmer2; putative. (195 aa)
VC_1731Conserved hypothetical protein; Identified by Glimmer2; putative. (82 aa)
VC_1841Conserved hypothetical protein; Identified by Glimmer2; putative. (105 aa)
VC_1871Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0304 family. (170 aa)
VC_1892Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0227 family. (179 aa)
VC_2073Conserved hypothetical protein; Identified by Glimmer2; putative. (198 aa)
VC_2112Conserved hypothetical protein; Identified by Glimmer2; putative. (87 aa)
VC_2238Conserved hypothetical protein; Identified by Glimmer2; putative. (281 aa)
VC_2264Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0325 family. (137 aa)
crlTranscriptional regulator Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family. (129 aa)
VC_2276Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0255 family. (415 aa)
VC_2346Smp protein, putative; Similar to SP:P18838 GB:M30784 GB:X03046 PID:432633 PID:436177; identified by sequence similarity; putative. (228 aa)
VC_2473Conserved hypothetical protein; Identified by Glimmer2; putative. (77 aa)
VC_2550Conserved hypothetical protein; Identified by Glimmer2; putative. (183 aa)
VC_2567Conserved hypothetical protein; Identified by Glimmer2; putative. (190 aa)
zapBConserved hypothetical protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA. (80 aa)
VC_2739Conserved hypothetical protein; Identified by Glimmer2; putative. (628 aa)
VC_A0569Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0181 family. (53 aa)
VC_A0717Helicase IV; Similar to GB:J04726 SP:P15038 PID:146328 GB:U00096 PID:1651467; identified by sequence similarity; putative. (699 aa)
VC_A0762Conserved hypothetical protein; Identified by Glimmer2; putative. (481 aa)
VC_A0763Conserved hypothetical protein; Identified by Glimmer2; putative. (552 aa)
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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