STRINGSTRING
VC_0765 VC_0765 VC_1731 VC_1731 VC_1892 VC_1892 VC_2264 VC_2264 crl crl VC_2276 VC_2276 VC_2473 VC_2473 VC_2550 VC_2550 VC_A0762 VC_A0762 VC_A0763 VC_A0763
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VC_0765Conserved hypothetical protein; Identified by Glimmer2; putative. (77 aa)
VC_1731Conserved hypothetical protein; Identified by Glimmer2; putative. (82 aa)
VC_1892Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0227 family. (179 aa)
VC_2264Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0325 family. (137 aa)
crlTranscriptional regulator Crl; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family. (129 aa)
VC_2276Conserved hypothetical protein; Identified by Glimmer2; putative; Belongs to the UPF0255 family. (415 aa)
VC_2473Conserved hypothetical protein; Identified by Glimmer2; putative. (77 aa)
VC_2550Conserved hypothetical protein; Identified by Glimmer2; putative. (183 aa)
VC_A0762Conserved hypothetical protein; Identified by Glimmer2; putative. (481 aa)
VC_A0763Conserved hypothetical protein; Identified by Glimmer2; putative. (552 aa)
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.