STRINGSTRING
VC_0032 VC_0032 VC_0047 VC_0047 VC_0048 VC_0048 VC_0399 VC_0399 VC_0400 VC_0400 VC_0401 VC_0401 VC_0402 VC_0402 VC_0403 VC_0403 VC_0404 VC_0404 VC_0405 VC_0405 VC_0406 VC_0406 VC_0407 VC_0407 VC_0408 VC_0408 VC_0409 VC_0409 VC_0410 VC_0410 VC_0411 VC_0411 VC_0412 VC_0412 VC_0413 VC_0413 VC_0414 VC_0414 VC_0417 VC_0417 VC_0418 VC_0418 VC_0419 VC_0419 VC_0420 VC_0420 VC_0421 VC_0421 VC_0422 VC_0422 VC_0462 VC_0462 VC_0463 VC_0463 VC_0502 VC_0502 VC_0857 VC_0857 VC_0858 VC_0858 VC_0859 VC_0859 VC_0860 VC_0860 VC_0861 VC_0861 VC_0862 VC_0862 VC_0863 VC_0863 VC_1612 VC_1612 VC_1879 VC_1879 VC_1887 VC_1887 VC_1917 VC_1917 VC_1980 VC_1980 VC_1981 VC_1981 VC_2168 VC_2168 VC_2423 VC_2423 VC_2424 VC_2424 pilC pilC VC_2426 VC_2426 VC_2498 VC_2498 VC_2535 VC_2535 VC_2630 VC_2630 VC_2631 VC_2631 VC_2632 VC_2632 VC_2633 VC_2633 VC_2634 VC_2634 VC_2719 VC_2719 epsN epsN epsM epsM epsL epsL epsK epsK epsJ epsJ epsI epsI epsH epsH epsG epsG epsF epsF epsE epsE epsC epsC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VC_0032ComM-related protein; Similar to GB:L42023 SP:P45049 PID:1006428 PID:1221236 PID:1205364; identified by sequence similarity; putative. (507 aa)
VC_0047Conserved hypothetical protein; Identified by Glimmer2; putative. (391 aa)
VC_0048Smf protein; Similar to GB:L42023 SP:P43862 PID:1006171 PID:1221098 PID:609332; identified by sequence similarity; putative. (371 aa)
VC_0399MSHA biogenesis protein MshI; Similar to PID:791156 PID:791153; identified by sequence similarity; putative. (479 aa)
VC_0400MSHA biogenesis protein MshJ; Similar to PID:791156 PID:791154; identified by sequence similarity; putative. (216 aa)
VC_0401MSHA biogenesis protein MshK; Similar to PID:791156 PID:791155; identified by sequence similarity; putative. (105 aa)
VC_0402MSHA biogenesis protein MshL; Similar to PID:791156; identified by sequence similarity; putative. (559 aa)
VC_0403MSHA biogenesis protein MshM; Similar to PID:791156 PID:791157; identified by sequence similarity; putative. (281 aa)
VC_0404MSHA biogenesis protein MshN; Similar to PID:791156 PID:791158; identified by sequence similarity; putative. (389 aa)
VC_0405MSHA biogenesis protein MshE; Similar to PID:791156 PID:791159; identified by sequence similarity; putative. (575 aa)
VC_0406MSHA biogenesis protein MshG; Similar to PID:1016255 PID:1016256; identified by sequence similarity; putative. (407 aa)
VC_0407MSHA biogenesis protein MshF; Similar to GB:X77217 PID:496757; identified by sequence similarity; putative. (150 aa)
VC_0408MSHA pilin protein MshB; Similar to GB:X77217 PID:496758; identified by sequence similarity; putative. (196 aa)
VC_0409MSHA pilin protein MshA; Similar to GP:673504; identified by sequence similarity; putative. (178 aa)
VC_0410MSHA pilin protein MshC; Similar to GB:X77217 PID:496759; identified by sequence similarity; putative. (162 aa)
VC_0411MSHA pilin protein MshD; Similar to GB:X77217 PID:673506 PID:673507; identified by sequence similarity; putative. (203 aa)
VC_0412Hypothetical protein; Identified by Glimmer2; putative. (256 aa)
VC_0413Hypothetical protein; Identified by Glimmer2; putative. (143 aa)
VC_0414Hypothetical protein; Identified by Glimmer2; putative. (1252 aa)
VC_0417Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family. (162 aa)
VC_0418Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (205 aa)
VC_0419Cytoplasmic axial filament protein; Similar to SP:P25537 PID:48826 PID:606187 GB:U00096 PID:1789645; identified by sequence similarity; putative. (489 aa)
VC_0420Conserved hypothetical protein; Identified by Glimmer2; putative. (1291 aa)
VC_0421Conserved hypothetical protein; Identified by Glimmer2; putative. (275 aa)
VC_0422tldD protein; Similar to SP:P46473 PID:606183 GB:U00096 PID:1732437 PID:1789640; identified by sequence similarity; putative. (481 aa)
VC_0462Twitching motility protein PilT; Similar to SP:P24559 GB:X67095 PID:151490; identified by sequence similarity; putative. (345 aa)
VC_0463Twitching motility protein PilT; Similar to SP:P24559 GB:X67095 PID:151490; identified by sequence similarity; putative. (368 aa)
VC_0502Type IV pilin, putative; Similar to SP:P00117; identified by sequence similarity; putative. (174 aa)
VC_0857Fimbrial assembly protein PilE, putative; Similar to GB:U02552 PID:1246304 PID:435924; identified by sequence similarity; putative. (147 aa)
VC_0858Type IV pilin, putative; Similar to PID:1161221; identified by sequence similarity; putative. (184 aa)
VC_0859Hypothetical protein; Identified by Glimmer2; putative. (200 aa)
VC_0860Hypothetical protein; Identified by Glimmer2; putative. (413 aa)
VC_0861Type IV pilin, putative; Similar to PID:1161222 PID:1246299 PID:643582; identified by sequence similarity; putative. (137 aa)
VC_0862Hypothetical protein; Identified by Glimmer2; putative. (122 aa)
VC_0863Conserved hypothetical protein; Identified by Glimmer2; putative. (519 aa)
VC_1612Fimbrial biogenesis and twitching motility protein, putative; Similar to PID:1162960; identified by sequence similarity; putative. (237 aa)
VC_1879Rec2-related protein; Similar to GB:L42023 SP:P44408 PID:1003026 PID:1221968 PID:1204319; identified by sequence similarity; putative. (752 aa)
VC_1887Hypothetical protein; Identified by Glimmer2; putative. (266 aa)
VC_1917Conserved hypothetical protein; Identified by Glimmer2; putative. (103 aa)
VC_1980Conserved hypothetical protein; Identified by Glimmer2; putative. (200 aa)
VC_1981Hypothetical protein; Identified by Glimmer2; putative. (222 aa)
VC_2168Hypothetical protein; Identified by Glimmer2; putative. (382 aa)
VC_2423Fimbrial protein; Similar to GB:M24281 SP:P08015 SP:P17837 GB:M14850 PID:151463; identified by sequence similarity; putative; Belongs to the N-Me-Phe pilin family. (167 aa)
VC_2424Type IV pilus assembly protein PilB; Similar to GP:3220230; identified by sequence similarity; putative. (562 aa)
pilCType IV pilin biogenesis protein PilC; Involved in the translocation of the type IV pilin; Belongs to the GSP F family. (408 aa)
VC_2426Leader peptidase PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (291 aa)
VC_2498Conserved hypothetical protein; Identified by Glimmer2; putative. (160 aa)
VC_2535pmbA protein; Similar to SP:P24231 GB:X54152 PID:42440 PID:537077 GB:U00096; identified by sequence similarity; putative. (447 aa)
VC_2630Fimbrial assembly protein; Similar to GB:L13865 SP:P34750 PID:459551; identified by sequence similarity; putative. (578 aa)
VC_2631Fimbrial assembly protein PilP, putative; Similar to PID:1173874 PID:1914828; identified by sequence similarity; putative. (172 aa)
VC_2632Fimbrial assembly protein PilO, putative; Similar to GB:U12892 PID:530858; identified by sequence similarity; putative. (199 aa)
VC_2633Fimbrial assembly protein PilN, putative; Similar to GB:U12892 PID:530857; identified by sequence similarity; putative. (196 aa)
VC_2634Fimbrial assembly protein PilM, putative; Similar to GB:L28837 PID:895925; identified by sequence similarity; putative. (338 aa)
VC_2719ComF-related protein; Similar to SP:P46846 PID:606348 GB:U00096 PID:1789818; identified by sequence similarity; putative. (286 aa)
epsNGeneral secretion pathway protein N; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (252 aa)
epsMCholera toxin secretion protein EpsM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (166 aa)
epsLGeneral secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (407 aa)
epsKGeneral secretion pathway protein K; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (336 aa)
epsJGeneral secretion pathway protein J; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (221 aa)
epsIGeneral secretion pathway protein I; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (117 aa)
epsHGeneral secretion pathway protein H; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (194 aa)
epsGGeneral secretion pathway protein G; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. Required for secretion of cholera toxin through the outer membrane. (146 aa)
epsFGeneral secretion pathway protein F; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (406 aa)
epsEGeneral secretion pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. Required for secretion of cholera toxin through the outer membrane. (503 aa)
epsCGeneral secretion pathway protein C; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane. (305 aa)
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.