STRINGSTRING
VC_A0404 VC_A0404 VC_A0405 VC_A0405 VC_A0406 VC_A0406 VC_A0407 VC_A0407 VC_A0408 VC_A0408 VC_A0409 VC_A0409 VC_A0410 VC_A0410
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VC_A0404Hypothetical protein; Identified by Glimmer2; putative. (44 aa)
VC_A0405Hypothetical protein; Identified by Glimmer2; putative. (206 aa)
VC_A0406Lipoprotein Blc; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (171 aa)
VC_A0407Hypothetical protein; Identified by Glimmer2; putative. (60 aa)
VC_A0408Hypothetical protein; Identified by Glimmer2; putative. (115 aa)
VC_A0409Hypothetical protein; Identified by Glimmer2; putative. (152 aa)
VC_A0410Hypothetical protein; Identified by Glimmer2; putative. (120 aa)
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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