STRINGSTRING
VC_0173 VC_0173 VC_1524 VC_1524 VC_1427 VC_1427 VC_1426 VC_1426 VC_1361 VC_1361 VC_1360 VC_1360 VC_1093 VC_1093 VC_1092 VC_1092 metI metI VC_0725 VC_0725 VC_0724 VC_0724 VC_0619 VC_0619 VC_0618 VC_0618 VC_0609 VC_0609 VC_0540 VC_0540 VC_0539 VC_0539 VC_1550 VC_1550 VC_0172 VC_0172 VC_0009 VC_0009 VC_A1100 VC_A1100 VC_A1099 VC_A1099 VC_A1040 VC_A1040 VC_A1038 VC_A1038 malF malF malG malG VC_A0758 VC_A0758 VC_A0757 VC_A0757 VC_A0725 VC_A0725 VC_A0686 VC_A0686 VC_A0601 VC_A0601 VC_A0590 VC_A0590 VC_A0589 VC_A0589 VC_A0072 VC_A0072 VC_A0071 VC_A0071 VC_2538 VC_2538 VC_1862 VC_1862 VC_1861 VC_1861 VC_1682 VC_1682 VC_1681 VC_1681 VC_1665 VC_1665 ugpE ugpE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VC_0173Peptide ABC transporter, permease protein; Similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964; identified by sequence similarity; putative. (312 aa)
VC_1524ABC transporter, permease protein; Similar to GB:AE000666; identified by sequence similarity; putative. (232 aa)
VC_1427Spermidine/putrescine ABC transporter, permease protein; Similar to GB:M64519 SP:P23860 PID:147327 GB:U00096 PID:1651552; identified by sequence similarity; putative. (286 aa)
VC_1426Spermidine/putrescine ABC transporter, permease protein; Similar to GB:M64519 SP:P23859 PID:147328 GB:U00096 PID:1651551; identified by sequence similarity; putative. (256 aa)
VC_1361Amino acid ABC transporter, permease protein; Similar to PID:1154895; identified by sequence similarity; putative. (401 aa)
VC_1360Amino acid ABC transporter, permease protein; Similar to SP:P45768 PID:606211 GB:U00096 PID:1789671; identified by sequence similarity; putative. (365 aa)
VC_1093Oligopeptide ABC transporter, permease protein; Similar to GB:U00096 SP:P77664 PID:1742034 PID:1787498 PID:1805526; identified by sequence similarity; putative. (300 aa)
VC_1092Oligopeptide ABC transporter, permease protein; Similar to GB:U00096 PID:1742033 PID:1787497 PID:1805525; identified by sequence similarity; putative. (306 aa)
metIABC transporter, permease protein; Part of the binding-protein-dependent transport system for D- methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (225 aa)
VC_0725Phosphate ABC transporter, permease protein; Similar to PID:633994 PID:1369911; identified by sequence similarity; putative. (548 aa)
VC_0724Phosphate ABC transporter, permease protein; Similar to PID:633992; identified by sequence similarity; putative. (731 aa)
VC_0619Peptide ABC transporter, permease protein; Similar to GB:Pyro_h; identified by sequence similarity; putative. (328 aa)
VC_0618Peptide ABC transporter, permease protein; Similar to GB:Pyro_h; identified by sequence similarity; putative. (341 aa)
VC_0609iron(III) ABC transporter, permease protein; Similar to PID:1001414 PID:1001407; identified by sequence similarity; putative. (541 aa)
VC_0540Sulfate ABC transporter, permease protein; Similar to GB:M32101 SP:P16702 PID:145660 GB:U00096 PID:1788762; identified by sequence similarity; putative. (287 aa)
VC_0539Sulfate ABC transporter, permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (283 aa)
VC_1550Glycerol-3-phosphate ABC transporter, permease protein; Similar to SP:P10905 GB:U00039 PID:43247 PID:466588 GB:U00096; identified by sequence similarity; putative. (293 aa)
VC_0172Peptide ABC transporter, permease protein; Similar to PID:1813496; identified by sequence similarity; putative. (342 aa)
VC_0009Amino acid ABC transproter, permease protein; Similar to PID:1006570 SP:P52625 PID:1006567; identified by sequence similarity; putative. (223 aa)
VC_A1100ABC transporter, permease protein; Similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964; identified by sequence similarity; putative. (270 aa)
VC_A1099ABC transporter, permease protein; Similar to SP:P33591 GB:X73143 PID:404846 PID:466613 GB:U00096; identified by sequence similarity; putative. (318 aa)
VC_A1040Amino acid ABC transporter, permease protein; Similar to GB:AE000782; identified by sequence similarity; putative. (298 aa)
VC_A1038Amino acid ABC transporter, permease protein; Similar to GB:AE000782; identified by sequence similarity; putative. (266 aa)
malFMaltose ABC transporter, permease protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane. (524 aa)
malGMaltose ABC transporter, permease protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane. (296 aa)
VC_A0758Arginine ABC transporter, permease protein; Similar to GB:L42023 SP:P45090 PID:1006545 PID:1221301 PID:972902; identified by sequence similarity; putative. (229 aa)
VC_A0757Arginine ABC transporter, permease protein; Similar to SP:P30862 GB:X67753 GB:X86160 PID:40933 PID:769793; identified by sequence similarity; putative. (222 aa)
VC_A0725Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (232 aa)
VC_A0686iron(III) ABC transporter, permease protein; Similar to PID:1469285 PID:1477454; identified by sequence similarity; putative. (700 aa)
VC_A0601ABC transporter, permease protein; Similar to GB:L42023 PID:1003160 PID:1222041 PID:1204387 PID:1573082; identified by sequence similarity; putative. (592 aa)
VC_A0590Peptide ABC transporter, permease protein, putative; Similar to SP:P33914 GB:U00008 PID:405905 GB:U00096 PID:1736843; identified by sequence similarity; putative. (360 aa)
VC_A0589Peptide ABC transporter, permease protein, putative; Similar to SP:P33915 GB:U00008 PID:405908 GB:U00096 PID:1736844; identified by sequence similarity; putative. (352 aa)
VC_A0072Phosphate ABC transporter, permease protein; Similar to GB:AE000783; identified by sequence similarity; putative. (289 aa)
VC_A0071Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (327 aa)
VC_2538Thiamine ABC transporter, permease protein, putative; Similar to GB:D10483 SP:P31549 PID:216487 GB:U00096 PID:1786254; identified by sequence similarity; putative. (530 aa)
VC_1862Amino acid ABC transporter, permease protein; Similar to PID:1166637 SP:P52094 GB:U00096 PID:1788646 PID:1799689; identified by sequence similarity; putative. (260 aa)
VC_1861Amino acid ABC transporter, permease protein; Similar to SP:P20091 GB:Y00455 PID:41704 GB:U00096 PID:1788645; identified by sequence similarity; putative. (225 aa)
VC_1682Peptide ABC transporter, permease protein; Similar to SP:P36669 GB:X74212 PID:414210; identified by sequence similarity; putative. (295 aa)
VC_1681Peptide ABC transporter, permease protein; Similar to GB:U00096 SP:Q47623 PID:1279401 PID:1742106 PID:1742115; identified by sequence similarity; putative. (320 aa)
VC_1665ABC transporter, permease protein, putative; Similar to GB:U00096 PID:1742865 PID:1788052; identified by sequence similarity; putative. (566 aa)
ugpEGlycerol-3-phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (280 aa)
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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