STRINGSTRING
VC_A1068 VC_A1068 VC_1062 VC_1062 VC_0071 VC_0071 VC_1713 VC_1713 VC_1904 VC_1904
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VC_A1068Transcriptional regulator, AsnC family; Similar to PID:1816639; identified by sequence similarity; putative. (160 aa)
VC_1062Transcriptional regulator, AsnC family; Similar to SP:P54986 GB:U00096 PID:1580718 PID:1773131 PID:1786652; identified by sequence similarity; putative. (178 aa)
VC_0071Transcriptional regulator AsnC; Similar to GB:L10328 SP:P03809 GB:K00826 PID:290592 PID:455179; identified by sequence similarity; putative. (153 aa)
VC_1713Transcriptional regulator, AsnC family; Similar to PID:1816639; identified by sequence similarity; putative. (147 aa)
VC_1904Leucine-responsive regulatory protein; Similar to SP:P37424 GB:U02274 PID:407918; identified by sequence similarity; putative. (164 aa)
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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