STRINGSTRING
VC_1557 VC_1557 purR purR VC_2337 VC_2337 VC_2677 VC_2677 VC_A0130 VC_A0130 VC_A0132 VC_A0132 VC_A0519 VC_A0519 VC_A0654 VC_A0654 VC_A0673 VC_A0673 VC_A0710 VC_A0710 luxP luxP VC_0289 VC_0289 VC_0909 VC_0909 lpoA lpoA VC_1101 VC_1101 VC_1286 VC_1286 VC_1325 VC_1325
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VC_1557Transcriptional regulator, LacI family; Similar to PID:882607 GB:U00096 PID:1789068; identified by sequence similarity; putative. (344 aa)
purRTranscriptional regulator, LacI family; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression. (336 aa)
VC_2337Transcriptional regulator, LacI family; Similar to GB:J01614 SP:P03024 GB:V00280 PID:146068 PID:41534; identified by sequence similarity; putative. (335 aa)
VC_2677Transcriptional repressor, LacI family; Similar to GB:L19201 SP:P06964 GB:M33293 GB:X03683 PID:305037; identified by sequence similarity; putative. (335 aa)
VC_A0130Ribose ABC transporter, periplasmic D-ribose-binding protein; Similar to GB:L42023 SP:P44737 PID:1003892 PID:1222436 PID:1204755; identified by sequence similarity; putative. (294 aa)
VC_A0132Ribose operon repressor; Similar to GB:L10328 SP:P25551 GB:D10466 GB:M13169 PID:147517; identified by sequence similarity; putative. (334 aa)
VC_A0519Fructose repressor; Similar to SP:P21930 PID:581763; identified by sequence similarity; putative. (326 aa)
VC_A0654Sucrose operon repressor ScrR, putative; Similar to GB:L14685 PID:289864; identified by sequence similarity; putative. (330 aa)
VC_A0673Transcriptional regulator, LacI family; Similar to GB:AL009126; identified by sequence similarity; putative. (343 aa)
VC_A0710Periplasmic protein TorT; Similar to GB:X78195 SP:P38683 PID:1122857 GB:U00096 PID:1787228; identified by sequence similarity; putative. (349 aa)
luxPluxP protein; Binds to the signaling molecule autoinducer 2 (AI-2), a furanosyl borate diester, (3a-methyl-5,6-dihydrofuro- [2,3d][1,3,2]dioxaborole-2,2,6,6a-tetraol). This complex then interacts with the LuxQ sensor protein (By similarity). (364 aa)
VC_0289Gluconate utilization system gnt-I transcriptional repressor; Similar to PID:1304069; identified by sequence similarity; putative. (332 aa)
VC_0909Trehalose operon repressor; Similar to SP:P36673 GB:U07790 PID:465107 PID:537083 GB:U00096; identified by sequence similarity; putative. (316 aa)
lpoALipoprotein, putative; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). (653 aa)
VC_1101Conserved hypothetical protein; Identified by Glimmer2; putative. (321 aa)
VC_1286Transcriptional regulator, LacI family; Similar to PID:882607 GB:U00096 PID:1789068; identified by sequence similarity; putative. (340 aa)
VC_1325Galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein; Similar to SP:P23905 GB:X52093; identified by sequence similarity; putative. (324 aa)
Your Current Organism:
Vibrio cholerae
NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961
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