(8 nodes) Bacterial extracellular solute-binding protein network (Vibrio cholerae)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Input:
	VC_1664	ABC transporter, periplasmic substrate-binding protein, putative; Similar to GB:U00096 PID:1788051; identified by sequence similarity; putative. (382 aa)
	VC_1425	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (366 aa)
	VC_0608	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to PID:1651916; identified by sequence similarity; putative. (352 aa)
	VC_1424	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (345 aa)
	VC_A0685	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative. (344 aa)
	VC_2539	Thiamin ABC transporter, periplasmic thiamin-binding protein; Similar to GB:D10483 SP:P31550 GB:U09984 PID:216488 PID:497658; identified by sequence similarity; putative. (330 aa)
	VC_A0726	Molybdenum ABC transporter, periplasmic molybdenum-binding protein; Similar to GB:L34009 SP:P37329 PID:504498 PID:973214 PID:1147817; identified by sequence similarity; putative. (254 aa)
	VC_A0706	Phosphoglycerate transport regulatory protein PgtC, putative; Similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative. (440 aa)

Your Current Organism:

Vibrio cholerae

NCBI taxonomy Id: 243277
Other names: V. cholerae O1 biovar El Tor str. N16961, Vibrio cholerae El Tor N16961, Vibrio cholerae O1 biovar El Tor str. N16961, Vibrio cholerae O1 biovar eltor str. N16961, Vibrio cholerae serotype O1 biotype El Tor strain N16961, Vibrio cholerae serotype O1 biotype ElTor strain N16961

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node1	node2	node1 annotation	node2 annotation	score
VC_0608	VC_1664	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to PID:1651916; identified by sequence similarity; putative.	ABC transporter, periplasmic substrate-binding protein, putative; Similar to GB:U00096 PID:1788051; identified by sequence similarity; putative.	0.528
VC_0608	VC_A0685	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to PID:1651916; identified by sequence similarity; putative.	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative.	0.453
VC_0608	VC_A0706	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to PID:1651916; identified by sequence similarity; putative.	Phosphoglycerate transport regulatory protein PgtC, putative; Similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative.	0.453
VC_1424	VC_1425	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.767
VC_1425	VC_1424	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	Spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.	0.767
VC_1664	VC_0608	ABC transporter, periplasmic substrate-binding protein, putative; Similar to GB:U00096 PID:1788051; identified by sequence similarity; putative.	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to PID:1651916; identified by sequence similarity; putative.	0.528
VC_1664	VC_A0685	ABC transporter, periplasmic substrate-binding protein, putative; Similar to GB:U00096 PID:1788051; identified by sequence similarity; putative.	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative.	0.416
VC_1664	VC_A0706	ABC transporter, periplasmic substrate-binding protein, putative; Similar to GB:U00096 PID:1788051; identified by sequence similarity; putative.	Phosphoglycerate transport regulatory protein PgtC, putative; Similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative.	0.416
VC_A0685	VC_0608	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative.	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to PID:1651916; identified by sequence similarity; putative.	0.453
VC_A0685	VC_1664	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative.	ABC transporter, periplasmic substrate-binding protein, putative; Similar to GB:U00096 PID:1788051; identified by sequence similarity; putative.	0.416
VC_A0685	VC_A0706	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative.	Phosphoglycerate transport regulatory protein PgtC, putative; Similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative.	0.754
VC_A0706	VC_0608	Phosphoglycerate transport regulatory protein PgtC, putative; Similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative.	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to PID:1651916; identified by sequence similarity; putative.	0.453
VC_A0706	VC_1664	Phosphoglycerate transport regulatory protein PgtC, putative; Similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative.	ABC transporter, periplasmic substrate-binding protein, putative; Similar to GB:U00096 PID:1788051; identified by sequence similarity; putative.	0.416
VC_A0706	VC_A0685	Phosphoglycerate transport regulatory protein PgtC, putative; Similar to GB:M21279 SP:P37591 GB:X52093 PID:154258; identified by sequence similarity; putative.	iron(III) ABC transporter, periplasmic iron-compound-binding protein; Similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative.	0.754