STRINGSTRING
flhA flhA flhB1 flhB1 CV_2603 CV_2603 spaS spaS CV_3001 CV_3001 CV_3002 CV_3002 fliP fliP fliQ2 fliQ2 fliR2 fliR2 flhB2 flhB2 fhiA fhiA fliR1 fliR1 fliQ1 fliQ1 fliP-2 fliP-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
flhAFlagellar biosynthesis protein flhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. (694 aa)
flhB1Flagellar biosynthetic protein flhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. (388 aa)
CV_2603Probable type III secretion system ATP synthase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1157/TC:3.A.6.1.1. (444 aa)
spaSSecretory protein / flagellar biosynthetic protein flhB; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1377/TC:3.A.6.1.1. (353 aa)
CV_3001Hypothetical protein. (280 aa)
CV_3002Probable flagellar motor switch protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1886. (116 aa)
fliPFlagellar biosynthetic protein fliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (248 aa)
fliQ2Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (90 aa)
fliR2Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (259 aa)
flhB2Flagellar biosynthetic protein flhB; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1377/TC:3.A.6.1.2. (379 aa)
fhiAfhiA protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1298. (570 aa)
fliR1Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. (252 aa)
fliQ1Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. (89 aa)
fliP-2Probable flagellar biosynthetic protein fliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (250 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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