STRINGSTRING
CV_0296 CV_0296 CV_0326 CV_0326 CV_0596 CV_0596 CV_0597 CV_0597 CV_2408 CV_2408 prgK prgK prgJ prgJ prgI prgI prgH prgH sseE sseE sseD sseD CV_2576 CV_2576 sseC sseC cesD cesD CV_2579 CV_2579 CV_2580 CV_2580 CV_2581 CV_2581 CV_2582 CV_2582 CV_2583 CV_2583 CV_2584 CV_2584 ssaG ssaG CV_2586 CV_2586 CV_2587 CV_2587 ssaJ ssaJ CV_2589 CV_2589 ssaL ssaL CV_2593 CV_2593 CV_2595 CV_2595 CV_2596 CV_2596 escC escC CV_2598 CV_2598 escV escV escR escR escS escS escT escT escU escU sipA sipA sipD sipD sipC sipC sipB sipB spaT spaT spaR spaR spaQ spaQ spaP spaP spaO spaO spaN spaN spaM spaM invC invC invB invB invA invA invE invE invG invG invF invF hilA hilA iagB iagB CV_3177 CV_3177 CV_3848 CV_3848 CV_3849 CV_3849
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CV_0296Conserved hypothetical protein; Activator for both CDC42 and RAC1 by directly interacting with these Rho GTPases and acting as a guanine nucleotide exchange factor (GEF). This activation results in actin cytoskeleton rearrangements and stimulates membrane ruffling, thus promoting bacterial entry into non-phagocytic cells. Belongs to the GEF (guanine exchange factor) SopE family. (241 aa)
CV_0326Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1262. (247 aa)
CV_0596Hypothetical protein. (147 aa)
CV_0597Hypothetical protein. (147 aa)
CV_2408Hypothetical protein. (317 aa)
prgKCell invasion protein; Lipoprotein, may link inner and outer membranes; identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1766/TC:3.A.6.1.1. (242 aa)
prgJCell invasion protein - cytoplasmic; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (100 aa)
prgICell invasion protein - cytoplasmic; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (84 aa)
prgHPathogenicity 1 island effector protein; Identified by sequence similarity; putative; ORF located using Blastx. (391 aa)
sseESecretion system effector SseE; Identified by sequence similarity; putative; ORF located using Blastx. (142 aa)
sseDSecretion system effector; Identified by sequence similarity; putative; ORF located using Blastx. (198 aa)
CV_2576Hypothetical protein. (251 aa)
sseCSecretion system effector; Identified by sequence similarity; putative; ORF located using Blastx/TC:1.C.36.2.2. (495 aa)
cesDType III secretion system CesD protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0457. (161 aa)
CV_2579Probable secreted protein EspA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (285 aa)
CV_2580Probable secreted protein EspA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (186 aa)
CV_2581Hypothetical protein. (121 aa)
CV_2582Probable secreted protein EspA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (262 aa)
CV_2583Probable secreted protein EspA; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840. (184 aa)
CV_2584Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2207. (262 aa)
ssaGSecretion system apparatus; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (71 aa)
CV_2586Probable type III secretion apparatus; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (93 aa)
CV_2587Hypothetical protein. (112 aa)
ssaJType III secretion system apparatus lipoprotein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1766/TC:3.A.6.1.1. (241 aa)
CV_2589Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (195 aa)
ssaLSecretion system apparatus; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (368 aa)
CV_2593Hypothetical protein. (2944 aa)
CV_2595Hypothetical protein. (73 aa)
CV_2596Probable type-III secretion protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/TC:3.A.6.1.1. (407 aa)
escCType III secretion system EscC protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1450/TC:1.B.22.3.3. (495 aa)
CV_2598Hypothetical protein. (129 aa)
escVType III secretion system EscV protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1298/TC:3.A.6.1.1. (683 aa)
escRType III secretion system EscR protein; Identified by sequence similarity; putative; ORF located using Blastx/COG4790. (216 aa)
escSType III secretion apparatus protein EscS; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1987/TC:3.A.6.1.1. (89 aa)
escTType III secretion system EscT protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1684/TC:3.A.6.1.1. (257 aa)
escUType III secretion system EscU protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1377/TC:3.A.6.1.1. (351 aa)
sipAInvasion protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (685 aa)
sipDPathogenicity island 1 effector protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (399 aa)
sipCCell invasion protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0840. (355 aa)
sipBCell invasion protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0840/TC:1.C.36.3.2. (583 aa)
spaTSurface presentation of antigens; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0457. (167 aa)
spaRSurface presentation of antigens; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1684/TC:3.A.6.1.1. (255 aa)
spaQSurface presentation of antigens; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1987/TC:3.A.6.1.1. (86 aa)
spaPSurface presentation of antigens; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1338/TC:3.A.6.1.1. (220 aa)
spaOSurface presentation of antigens; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1886. (296 aa)
spaNSurface presentation of antigens; Identified by sequence similarity; putative; ORF located using Blastx. (333 aa)
spaMSecretory protein, associated with virulence; Identified by sequence similarity; putative; ORF located using Blastx/COG1196. (151 aa)
invCSurface presentation of antigens, secretory proteins; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1157. (429 aa)
invBSurface presentation of antigens, secretory protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (135 aa)
invAInvasion protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1298/TC:3.A.6.1.1. (686 aa)
invEInvasion protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (373 aa)
invGInvasion protein - outer membrane; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1450/TC:1.B.22.3.2. (561 aa)
invFAraC-family regulatory protein/invasion protein; Identified by sequence similarity; putative; ORF located using Blastx/COG2207. (197 aa)
hilAInvasion genes transcription activator; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0457. (561 aa)
iagBCell invasion protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0741. (151 aa)
CV_3177Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx. (146 aa)
CV_3848Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0631. (292 aa)
CV_3849Probable serine/threonine kinase; Identified by sequence similarity; putative; ORF located using Blastx/COG0515. (298 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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