STRINGSTRING
CV_0077 CV_0077 CV_0078 CV_0078 tolR tolR CV_0108 CV_0108 tolB tolB pal pal cpoB cpoB exbD2 exbD2 CV_0399 CV_0399 CV_0400 CV_0400 CV_0496 CV_0496 tolQ tolQ CV_0793 CV_0793 CV_0794 CV_0794 CV_0795 CV_0795 CV_0796 CV_0796 fsr fsr CV_0799 CV_0799 CV_1447 CV_1447 CV_1487 CV_1487 fecD fecD CV_1489 CV_1489 CV_1490 CV_1490 CV_1491 CV_1491 CV_1520 CV_1520 btuC btuC CV_1559 CV_1559 CV_1560 CV_1560 cobW cobW CV_1793 CV_1793 hmuU hmuU CV_1970 CV_1970 CV_1971 CV_1971 exbB1 exbB1 exbD5 exbD5 exbD3 exbD3 CV_1982 CV_1982 CV_1983 CV_1983 exbB2 exbB2 exbD1 exbD1 exbD4 exbD4 CV_1987 CV_1987 fepA fepA fepC fepC fepG fepG fepD fepD CV_2250 CV_2250 fhuA fhuA CV_2403 CV_2403 CV_2665 CV_2665 CV_2666 CV_2666 CV_3188 CV_3188 CV_3342 CV_3342 CV_3345 CV_3345 exdD exdD CV_3348 CV_3348 CV_3349 CV_3349 CV_3350 CV_3350 ptrB ptrB CV_3895 CV_3895 CV_3896 CV_3896 CV_3897 CV_3897 CV_3898 CV_3898 fecE fecE CV_3906 CV_3906 CV_4254 CV_4254
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CV_0077Probable TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.1.6. (852 aa)
CV_0078Hypothetical protein. (66 aa)
tolRTolR protein; Identified by sequence similarity; putative; ORF located using Blastx/TC:2.C.1.2.1. (137 aa)
CV_0108Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0810/TC:2.C.1.1.1. (297 aa)
tolBTolB protein precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (428 aa)
palPeptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (172 aa)
cpoBConserved hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (246 aa)
exbD2Biopolymer transport exbD transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0848/TC:2.C.1.1.1. (136 aa)
CV_0399Probable exbB-like biopolymer transport; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0811/TC:2.C.1.2.1. (225 aa)
CV_0400Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0810/TC:2.C.1.1.1. (275 aa)
CV_0496Probable substrate-binding periplasmatic (PBP) ABC transporter protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0614. (291 aa)
tolQtolQ-related transport transmembrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (222 aa)
CV_0793Probable nitrogen fixation protein VnfA; Identified by sequence similarity; putative; ORF located using Blastx/COG0348. (485 aa)
CV_0794Probable high-affinity iron permease; Identified by sequence similarity; putative; ORF located using Blastx/COG0672/TC:9.A.10.1.1. (249 aa)
CV_0795Hypothetical protein. (111 aa)
CV_0796Probable periplasmic protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3470. (180 aa)
fsrFosmidomycin resistance protein, MFS family; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0477/TC:2.A.1.35.1. (399 aa)
CV_0799Probable transcriptional regulator, AraC/XylS family; Identified by sequence similarity; putative; ORF located using Blastx/COG2207. (257 aa)
CV_1447Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx. (1097 aa)
CV_1487Probable iron transport system ATP-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1120/TC:3.A.1.14.3. (255 aa)
fecDFerric citrate transport system permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0609/TC:3.A.1.14.5; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (355 aa)
CV_1489Probable periplasmic substrate-binding transport protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0614. (369 aa)
CV_1490Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3553. (93 aa)
CV_1491Probable outer membrane receptor; Identified by sequence similarity; putative; ORF located using Blastx/COG4771. (699 aa)
CV_1520Hypothetical protein. (276 aa)
btuCVitamin B12 transport system permease protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0609/TC:3.A.1.13.1; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (332 aa)
CV_1559Probable iron transport system substrate-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0614. (320 aa)
CV_1560Probable iron transport system ATP-binding protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1120/TC:3.A.1.14.3. (260 aa)
cobWCobalamin synthesis protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0523. (368 aa)
CV_1793Probable iron transport system ATP-binding protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1120. (266 aa)
hmuUHemin transport system permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0609/TC:3.A.1.14.5; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (321 aa)
CV_1970Probable TonB-dependent receptor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.1.6. (854 aa)
CV_1971Conserved hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (216 aa)
exbB1Biopolymer transport protein; Identified by sequence similarity; putative. (248 aa)
exbD5Biopolymer transport exbD transmembrane protein; Identified by sequence similarity; putative;/COG0848/TC:2.C.1.1.1. (147 aa)
exbD3Biopolymer transport exbD transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0848. (140 aa)
CV_1982Probable tonB dependent receptor; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1629/TC:1.B.14.3.1. (868 aa)
CV_1983Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/Blastx/COG0810/TC:2.C.1.1.1. (234 aa)
exbB2Biopolymer transport protein; Identified by sequence similarity; putative. (248 aa)
exbD1Biopolymer transport exbD transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0848. (147 aa)
exbD4Biopolymer transport exbD transmembrane protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0848. (140 aa)
CV_1987Probable metallopeptidase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG3590. (667 aa)
fepAEnterobactin-iron outermembrane receptor protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1629/TC:1.B.14.7.1. (684 aa)
fepCEnterobactin-iron transport system ATP-binding protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1120. (278 aa)
fepGEnterobactin-iron transport system permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0609/TC:3.A.1.14.2; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (347 aa)
fepDEnterobactin-iron transport system permease protein; Identified by sequence similarity; putative; ORF located using Blastx/COG0609/TC:3.A.1.14.2; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (338 aa)
CV_2250Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG3182. (364 aa)
fhuAFerrichrome-iron outermembrane receptor protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1629/TC:1.B.14.1.4. (716 aa)
CV_2403Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (474 aa)
CV_2665Hypothetical protein. (193 aa)
CV_2666Hypothetical protein. (171 aa)
CV_3188Probable TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1629/TC:1.B.14.1.2. (783 aa)
CV_3342Probable hemolysin III; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1272/TC:9.B.30.1.1. (205 aa)
CV_3345Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG2835; Belongs to the UPF0434 family. (60 aa)
exdDBiopolymer transport exbD-related transmembrane protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0848/TC:2.C.1.1.1. (138 aa)
CV_3348Probable exbB-like biopolymer transport; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0811/TC:2.C.1.2.1. (204 aa)
CV_3349Hypothetical protein. (70 aa)
CV_3350Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx. (153 aa)
ptrBProlyl oligopeptidase family protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1505. (689 aa)
CV_3895Hypothetical protein. (57 aa)
CV_3896Probable TonB-dependent receptor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1629/TC:1.B.14.2.4. (735 aa)
CV_3897Probable hemin degrading factor; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx. (344 aa)
CV_3898Probable permease of ABC transporter; Identified by sequence similarity; putative; ORF located using Blastx/COG0609; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (312 aa)
fecEFerric citrate transport system ATP-binding protein; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG1120. (255 aa)
CV_3906Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0810/TC:2.C.1.1.1. (243 aa)
CV_4254Probable TonB protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0810. (278 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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