STRINGSTRING
gatA gatA CV_0797 CV_0797 cobB cobB nadE nadE asnB asnB purL purL guaA guaA CV_3764 CV_3764 carB carB carA carA CV_3959 CV_3959 gatB gatB gatC gatC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gatAGlu-tRNA(Gln) amidotransferase, subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (483 aa)
CV_0797Probable asparagine synthase; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0367. (618 aa)
cobBCobyrinic acid A,C-diamide synthase; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1797. (430 aa)
nadEGlutamine-dependent NAD+ synthetase signal peptide protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (530 aa)
asnBAsparagine synthetase, glutamine-hydrolysing; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0367. (616 aa)
purLPhophoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. (1319 aa)
guaAGMP synthetase; Catalyzes the synthesis of GMP from XMP. (525 aa)
CV_3764Conserved hypothetical protein; Identified by sequence similarity; putative; ORF located using Blastx/COG1610. (148 aa)
carBCarbamoyl-phosphate synthase large chain; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0458; Belongs to the CarB family. (1069 aa)
carACarbomyl phosphate synthetase small subunit; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0505; Belongs to the CarA family. (375 aa)
CV_3959Probable asparagine synthetase B; Identified by sequence similarity; putative; ORF located using GeneMark/Blastx/COG0367. (662 aa)
gatBGlu-tRNA(Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (475 aa)
gatCGlu-tRNA(Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (95 aa)
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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